RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 RBM25P49756 843 aaKnown RBP27.16■■□□□ 1.94
HLA-C-209ENST00000495835 HMGN5P82970 282 aaKnown RBP27.16■■□□□ 1.94
HLA-C-209ENST00000495835 TFF2Q03403 129 aa27.16■■□□□ 1.94
HLA-C-209ENST00000495835 SPIRE1Q08AE8 756 aa27.16■■□□□ 1.94
HLA-C-209ENST00000495835 ST3GAL1Q11201 340 aa27.16■■□□□ 1.94
HLA-C-209ENST00000495835 SAFBQ15424 915 aaKnown RBP eCLIP27.16■■□□□ 1.94
HLA-C-209ENST00000495835 OTUD6AQ7L8S5 288 aa27.16■■□□□ 1.94
HLA-C-209ENST00000495835 ZNF410Q86VK4 478 aa27.16■■□□□ 1.94
HLA-C-209ENST00000495835 KIF2CQ99661 725 aa27.16■■□□□ 1.94
HLA-C-209ENST00000495835 INO80BQ9C086 356 aaPredicted RBP27.16■■□□□ 1.94
HLA-C-209ENST00000495835 CYP26B1Q9NR63 512 aa27.16■■□□□ 1.94
HLA-C-209ENST00000495835 PCDHA12Q9UN75 941 aa27.16■■□□□ 1.94
HLA-C-209ENST00000495835 NCK2O43639 380 aa27.15■■□□□ 1.94
HLA-C-209ENST00000495835 ADAMTS19Q8TE59 1207 aa27.15■■□□□ 1.94
HLA-C-209ENST00000495835 NLRP7Q8WX94 980 aa27.15■■□□□ 1.94
HLA-C-209ENST00000495835 GCOM2Q9BZD3 368 aaPredicted RBP27.15■■□□□ 1.94
HLA-C-209ENST00000495835 NSUN3Q9H649 340 aaKnown RBP27.15■■□□□ 1.94
HLA-C-209ENST00000495835 MRPL42Q9Y6G3 142 aaKnown RBP27.15■■□□□ 1.94
HLA-C-209ENST00000495835 FNDC1Q4ZHG4 1894 aaPredicted RBP27.15■■□□□ 1.94
HLA-C-209ENST00000495835 FAM205CA6NFA0 338 aa27.14■■□□□ 1.94
HLA-C-209ENST00000495835 HOXA2O43364 376 aa27.14■■□□□ 1.94
HLA-C-209ENST00000495835 SLC7A3Q8WY07 619 aa27.14■■□□□ 1.94
HLA-C-209ENST00000495835 SCLT1Q96NL6 688 aa27.14■■□□□ 1.94
HLA-C-209ENST00000495835 ZSWIM4Q9H7M6 989 aa27.14■■□□□ 1.94
HLA-C-209ENST00000495835 ATP6V0A4Q9HBG4 840 aa27.14■■□□□ 1.94
HLA-C-209ENST00000495835 CHST12Q9NRB3 414 aa27.14■■□□□ 1.94
HLA-C-209ENST00000495835 TNFRSF10AO00220 468 aa27.13■■□□□ 1.93
HLA-C-209ENST00000495835 GAS2O43903 313 aaKnown RBP27.13■■□□□ 1.93
HLA-C-209ENST00000495835 RFC5P40937 340 aa27.13■■□□□ 1.93
HLA-C-209ENST00000495835 CALCRLQ16602 461 aa27.13■■□□□ 1.93
HLA-C-209ENST00000495835 CCDC83Q8IWF9 413 aa27.13■■□□□ 1.93
HLA-C-209ENST00000495835 NEK9Q8TD19 979 aa27.13■■□□□ 1.93
HLA-C-209ENST00000495835 LXNQ9BS40 222 aa27.13■■□□□ 1.93
HLA-C-209ENST00000495835 UBE2ZQ9H832 354 aaPredicted RBP27.13■■□□□ 1.93
HLA-C-209ENST00000495835 AAASQ9NRG9 546 aa27.13■■□□□ 1.93
HLA-C-209ENST00000495835 SUCLA2Q9P2R7 463 aaPredicted RBP27.13■■□□□ 1.93
HLA-C-209ENST00000495835 NCOR1O75376 2440 aa27.13■■□□□ 1.93
HLA-C-209ENST00000495835 KIAA1671Q9BY89 1806 aa27.12■■□□□ 1.93
HLA-C-209ENST00000495835 TMEM150BA6NC51 233 aa27.12■■□□□ 1.93
HLA-C-209ENST00000495835 ORC2Q13416 577 aaPredicted RBP27.12■■□□□ 1.93
HLA-C-209ENST00000495835 NCAPH2Q6IBW4 605 aa27.12■■□□□ 1.93
HLA-C-209ENST00000495835 C8orf76Q96K31 380 aa27.12■■□□□ 1.93
HLA-C-209ENST00000495835 CEP170P1Q96L14 293 aa27.12■■□□□ 1.93
HLA-C-209ENST00000495835 UHRF1Q96T88 793 aaPredicted RBP27.12■■□□□ 1.93
HLA-C-209ENST00000495835 DHX33Q9H6R0 707 aaKnown RBP27.12■■□□□ 1.93
HLA-C-209ENST00000495835 DACT1Q9NYF0 836 aa27.12■■□□□ 1.93
HLA-C-209ENST00000495835 PLAGL2Q9UPG8 496 aa27.12■■□□□ 1.93
HLA-C-209ENST00000495835 BRWD1Q9NSI6 2320 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 GRM6O15303 877 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 NEMFO60524 1076 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 EOMESO95936 686 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 YWHABP31946 246 aaKnown RBP27.11■■□□□ 1.93
HLA-C-209ENST00000495835 DRP2Q13474 957 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 COL19A1Q14993 1142 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 CSPP1Q1MSJ5 1256 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 PAN2Q504Q3 1202 aaKnown RBP27.11■■□□□ 1.93
HLA-C-209ENST00000495835 RSPH1Q8WYR4 309 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 MTMR9Q96QG7 549 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 TRAIPQ9BWF2 469 aa27.11■■□□□ 1.93
HLA-C-209ENST00000495835 FOXP1Q9H334 677 aaPredicted RBP27.11■■□□□ 1.93
HLA-C-209ENST00000495835 A0A0U1RQF3 1178 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 SLITRK3O94933 977 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 LYPLA2O95372 231 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 SFPQP23246 707 aaKnown RBP eCLIP27.1■■□□□ 1.93
HLA-C-209ENST00000495835 KCNQ1P51787 676 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 FBXO18Q8NFZ0 1043 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 PABPC5Q96DU9 382 aaKnown RBP27.1■■□□□ 1.93
HLA-C-209ENST00000495835 DYDC2Q96IM9 177 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 HSD17B14Q9BPX1 270 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 SH2D3AQ9BRG2 576 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 TMEM117Q9H0C3 514 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 TTC12Q9H892 705 aaPredicted RBP27.1■■□□□ 1.93
HLA-C-209ENST00000495835 WRAP73Q9P2S5 460 aaPredicted RBP27.1■■□□□ 1.93
HLA-C-209ENST00000495835 PCDHB12Q9Y5F1 795 aa27.1■■□□□ 1.93
HLA-C-209ENST00000495835 A0A087WZ62 844 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 TBKBP1A7MCY6 615 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 ASAP2O43150 1006 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 POLGP54098 1239 aaPredicted RBP27.09■■□□□ 1.93
HLA-C-209ENST00000495835 NPEPPSP55786 919 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 RABEP1Q15276 862 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 LEXMQ3ZCV2 418 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 TCEAL5Q5H9L2 206 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 FAM102BQ5T8I3 360 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 PLA2G4FQ68DD2 849 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 ECHDC2Q86YB7 292 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 RHPN2Q8IUC4 686 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 TCP11Q8WWU5 503 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 FDXACB1Q9BRP7 624 aaPredicted RBP27.09■■□□□ 1.93
HLA-C-209ENST00000495835 RGL1Q9NZL6 768 aa27.09■■□□□ 1.93
HLA-C-209ENST00000495835 TCF20Q9UGU0 1960 aaKnown RBP27.09■■□□□ 1.93
HLA-C-209ENST00000495835 UBE3AQ05086 875 aa27.08■■□□□ 1.93
HLA-C-209ENST00000495835 PUS10Q3MIT2 529 aaKnown RBP27.08■■□□□ 1.93
HLA-C-209ENST00000495835 FAM184AQ8NB25 1140 aa27.08■■□□□ 1.93
HLA-C-209ENST00000495835 KLHL23Q8NBE8 558 aa27.08■■□□□ 1.93
HLA-C-209ENST00000495835 SPPL3Q8TCT6 385 aa27.08■■□□□ 1.93
HLA-C-209ENST00000495835 EIF2AK1Q9BQI3 630 aaKnown RBP27.08■■□□□ 1.93
HLA-C-209ENST00000495835 BDP1A6H8Y1 2624 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 ITGB1P05556 798 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 SKIP12755 728 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 XRCC6P12956 609 aaKnown RBP eCLIP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms