RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 DOCK3Q8IZD9 2030 aa11.85□□□□□ -0.51
ECHDC3-204ENST00000495787 TMEM150BA6NC51 233 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 SFI1A8K8P3 1242 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 LGR5O75473 907 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 GCNT3O95395 438 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 SNAI1O95863 264 aaPredicted RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 OATP04181 439 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 MYBP10242 640 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 SYN1P17600 705 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 CASP5P51878 434 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 COPB1P53618 953 aaKnown RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 NPEPPSP55786 919 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 ALCAMQ13740 583 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 PLA2G4FQ68DD2 849 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 TMC6Q7Z403 805 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 VSTM4Q8IW00 320 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 DAW1Q8N136 415 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 NPLOC4Q8TAT6 608 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 CEP170P1Q96L14 293 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 DRC1Q96MC2 740 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 FIZ1Q96SL8 496 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 PCYT2Q99447 389 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 GPR20Q99678 358 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 TINF2Q9BSI4 451 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 COL25A1Q9BXS0 654 aaPredicted RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 NIFKQ9BYG3 293 aaKnown RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 UBE2OQ9C0C9 1292 aaKnown RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 KATNBL1Q9H079 304 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 KCTD10Q9H3F6 313 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 POLD4Q9HCU8 107 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 PDGFCQ9NRA1 345 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 INTS13Q9NVM9 706 aa11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 LARSQ9P2J5 1176 aaKnown RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
ECHDC3-204ENST00000495787 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 PDXKO00764 312 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 CALUO43852 315 aaPredicted RBP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 DGAT1O75907 488 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 PRPF6O94906 941 aaKnown RBP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 GH1P01241 217 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 HOXC6P09630 235 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 PLS3P13797 630 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 ATP4AP20648 1035 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 NMT1P30419 496 aaKnown RBP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 TCF7P36402 384 aaPredicted RBP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 STAT5BP51692 787 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 FKBP3Q00688 224 aaKnown RBP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 LAMC2Q13753 1193 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 EDRF1Q3B7T1 1238 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 ODR4Q5SWX8 454 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 ZNF720Q7Z2F6 126 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 NELFCDQ8IXH7 590 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 FAM178BQ8IXR5 827 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 ZC3H3Q8IXZ2 948 aaKnown RBP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 MCPH1Q8NEM0 835 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 USP6NLQ92738 828 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 KIFAP3Q92845 792 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 CNOT6LQ96LI5 555 aaKnown RBP11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 CEP63Q96MT8 703 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 SPATA33Q96N06 139 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 ABHD16BQ9H3Z7 469 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 PDLIM7Q9NR12 457 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 NRBP1Q9UHY1 535 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 OGDHLQ9ULD0 1010 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 TRAF3IP3Q9Y228 551 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 PPME1Q9Y570 386 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 PCDHB13Q9Y5F0 798 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 EMSYQ7Z589 1322 aa11.83□□□□□ -0.52
ECHDC3-204ENST00000495787 N4BP3O15049 544 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 TPM2P07951 284 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 HOXD13P35453 343 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 GSDMDP57764 484 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 ARHGAP1Q07960 439 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 CCDC144BQ3MJ40 725 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 IQSEC1Q6DN90 963 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 LRRC55Q6ZSA7 311 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 MAEAQ7L5Y9 396 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 PLPPR4Q7Z2D5 763 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 FILIP1Q7Z7B0 1213 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 COPS5Q92905 334 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 EMID1Q96A84 441 aaPredicted RBP11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 SH2D3AQ9BRG2 576 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 STRA6Q9BX79 667 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 ST6GALNAC4Q9H4F1 302 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 C17orf75Q9HAS0 396 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 TYW1Q9NV66 732 aaKnown RBP11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 TAB2Q9NYJ8 693 aa11.82□□□□□ -0.52
ECHDC3-204ENST00000495787 NKRFO15226 690 aaKnown RBP eCLIP11.81□□□□□ -0.52
ECHDC3-204ENST00000495787 TEX33O43247 280 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms