RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 SYCP3Q8IZU3 236 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 CLEC4DQ8WXI8 215 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 COL20A1Q9P218 1284 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 INTUQ9ULD6 942 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 PACSIN2Q9UNF0 486 aaPredicted RBP16.72■□□□□ 0.27
CALD1-222ENST00000495522 MYH11P35749 1972 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 NFIBO00712 420 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 H2AFZP0C0S5 128 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 SOX5P35711 763 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 MRPS25P82663 173 aaKnown RBP16.72■□□□□ 0.27
CALD1-222ENST00000495522 GHRHRQ02643 423 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 MYBPC2Q14324 1141 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 H2AFVQ71UI9 128 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 LRRC57Q8N9N7 239 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 LPAR1Q92633 364 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 STK33Q9BYT3 514 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 PKD2L1Q9P0L9 805 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 DAAM1Q9Y4D1 1078 aa16.72■□□□□ 0.27
CALD1-222ENST00000495522 A0A0A6YYK5 440 aaPredicted RBP16.71■□□□□ 0.27
CALD1-222ENST00000495522 GOLGA6BA6NDN3 693 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 PHF20L1A8MW92 1017 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 F8VZ95 297 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 GGCXP38435 758 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 CXCL9Q07325 125 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 FMNL3Q8IVF7 1028 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 DAW1Q8N136 415 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 GOLGA6L1Q8N7Z2 621 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 IL31RAQ8NI17 732 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 FAM204AQ9H8W3 233 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 K7ENM7 598 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 DDX3XO00571 662 aaKnown RBP eCLIP16.71■□□□□ 0.27
CALD1-222ENST00000495522 DHX15O43143 795 aaKnown RBP16.71■□□□□ 0.27
CALD1-222ENST00000495522 EVI5O60447 810 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 EXOC3O60645 756 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 KIF4AO95239 1232 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 MAPTP10636 758 aaKnown RBP16.71■□□□□ 0.27
CALD1-222ENST00000495522 MYL7Q01449 175 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 ALCAMQ13740 583 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 TKFCQ3LXA3 575 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 CBWD6Q4V339 395 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 CBWD3Q5JTY5 395 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 CBWD5Q5RIA9 395 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 PCNX4Q63HM2 1172 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 IFT20Q8IY31 132 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 LMBR1Q8WVP7 490 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 PBKQ96KB5 322 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 INTS2Q9H0H0 1204 aaKnown RBP16.71■□□□□ 0.27
CALD1-222ENST00000495522 AGO4Q9HCK5 861 aaKnown RBP16.71■□□□□ 0.27
CALD1-222ENST00000495522 MYOZ2Q9NPC6 264 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 LARSQ9P2J5 1176 aaKnown RBP16.71■□□□□ 0.27
CALD1-222ENST00000495522 DBR1Q9UK59 544 aaKnown RBP16.71■□□□□ 0.27
CALD1-222ENST00000495522 DNAJC12Q9UKB3 198 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 UBIAD1Q9Y5Z9 338 aa16.71■□□□□ 0.27
CALD1-222ENST00000495522 TRIM49P0CI25 452 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 TRIM49CP0CI26 452 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 CHRM1P11229 460 aaPredicted RBP16.7■□□□□ 0.26
CALD1-222ENST00000495522 ALAS1P13196 640 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 BFSP1Q12934 665 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 USP38Q8NB14 1042 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 TPCN2Q8NHX9 752 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 SLC16A10Q8TF71 515 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 U2AF1L4Q8WU68 220 aaKnown RBP16.7■□□□□ 0.26
CALD1-222ENST00000495522 CAVIN3Q969G5 261 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 AGPSO00116 658 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 KCNK3O14649 394 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 CCDC172P0C7W6 258 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 LMNB1P20700 586 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 ITGB3BPQ13352 177 aaPredicted RBP16.7■□□□□ 0.26
CALD1-222ENST00000495522 NNTQ13423 1086 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 RASA3Q14644 834 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 DRAP1Q14919 205 aaPredicted RBP16.7■□□□□ 0.26
CALD1-222ENST00000495522 AFAP1L1Q8TED9 768 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 KIAA1683Q9H0B3 1180 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 TMEM206Q9H813 350 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 GDF3Q9NR23 364 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 MAP3K20Q9NYL2 800 aaKnown RBP16.7■□□□□ 0.26
CALD1-222ENST00000495522 APEX2Q9UBZ4 518 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
CALD1-222ENST00000495522 HEXIM1O94992 359 aaKnown RBP16.69■□□□□ 0.26
CALD1-222ENST00000495522 CAPN2P17655 700 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 QARSP47897 775 aaKnown RBP16.69■□□□□ 0.26
CALD1-222ENST00000495522 NPEPPSP55786 919 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 HNRNPH2P55795 449 aaKnown RBP16.69■□□□□ 0.26
CALD1-222ENST00000495522 TNNC1P63316 161 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 DNAAF5Q86Y56 855 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 CPXCR1Q8N123 301 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 SAMD3Q8N6K7 520 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 SLC30A5Q8TAD4 765 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 SYTL5Q8TDW5 730 aaPredicted RBP16.69■□□□□ 0.26
CALD1-222ENST00000495522 KRT12Q99456 494 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 SLC38A10Q9HBR0 1119 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 SAMM50Q9Y512 469 aa16.69■□□□□ 0.26
CALD1-222ENST00000495522 LYPLA2O95372 231 aa16.68■□□□□ 0.26
CALD1-222ENST00000495522 GLI1P08151 1106 aa16.68■□□□□ 0.26
CALD1-222ENST00000495522 KRT13P13646 458 aa16.68■□□□□ 0.26
CALD1-222ENST00000495522 RFX1P22670 979 aa16.68■□□□□ 0.26
CALD1-222ENST00000495522 ACTN2P35609 894 aa16.68■□□□□ 0.26
CALD1-222ENST00000495522 MRPS9P82933 396 aaKnown RBP16.68■□□□□ 0.26
CALD1-222ENST00000495522 MTMR1Q13613 665 aa16.68■□□□□ 0.26
CALD1-222ENST00000495522 PLS1Q14651 629 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms