RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 DARSP14868 501 aaKnown RBP20.13■□□□□ 0.81
COL20A1-207ENST00000494913 YWHABP31946 246 aaKnown RBP20.13■□□□□ 0.81
COL20A1-207ENST00000494913 SARSP49591 514 aaKnown RBP20.13■□□□□ 0.81
COL20A1-207ENST00000494913 CDC42EP1Q00587 391 aa20.13■□□□□ 0.81
COL20A1-207ENST00000494913 SKIV2LQ15477 1246 aaKnown RBP20.13■□□□□ 0.81
COL20A1-207ENST00000494913 ZNF174Q15697 407 aa20.13■□□□□ 0.81
COL20A1-207ENST00000494913 SLC24A5Q71RS6 500 aa20.13■□□□□ 0.81
COL20A1-207ENST00000494913 OTUD6AQ7L8S5 288 aa20.13■□□□□ 0.81
COL20A1-207ENST00000494913 NOSTRINQ8IVI9 506 aa20.13■□□□□ 0.81
COL20A1-207ENST00000494913 JPH2Q9BR39 696 aaPredicted RBP20.13■□□□□ 0.81
COL20A1-207ENST00000494913 C1orf112Q9NSG2 853 aa20.13■□□□□ 0.81
COL20A1-207ENST00000494913 LMCD1Q9NZU5 365 aa20.13■□□□□ 0.81
COL20A1-207ENST00000494913 PCDHB7Q9Y5E2 793 aa20.13■□□□□ 0.81
COL20A1-207ENST00000494913 CSDE1O75534 798 aaKnown RBP20.12■□□□□ 0.81
COL20A1-207ENST00000494913 RHPN2Q8IUC4 686 aa20.12■□□□□ 0.81
COL20A1-207ENST00000494913 SLC7A3Q8WY07 619 aa20.12■□□□□ 0.81
COL20A1-207ENST00000494913 HSD17B14Q9BPX1 270 aa20.12■□□□□ 0.81
COL20A1-207ENST00000494913 CUL9Q8IWT3 2517 aa20.12■□□□□ 0.81
COL20A1-207ENST00000494913 C9IYK1 514 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 H3BNC9 293 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 FGFR4P22455 802 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 CTNNB1P35222 781 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 POLGP54098 1239 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 GPM6BQ13491 265 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 DSC3Q14574 896 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 XKR9Q5GH70 373 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 EXOC8Q8IYI6 725 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 GCOM2Q9BZD3 368 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 THEGQ9P2T0 379 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 KIF3AQ9Y496 699 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 COL4A4P53420 1690 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 COL4A6Q14031 1691 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 A0A087WZ62 844 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 ZSCAN20P17040 1043 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 BMPR1AP36894 532 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 MCM2P49736 904 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 GATMP50440 423 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 PAN2Q504Q3 1202 aaKnown RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 KSR1Q8IVT5 923 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 CMTR2Q8IYT2 770 aaKnown RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 CLP1Q92989 425 aaKnown RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 FDXACB1Q9BRP7 624 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 DHX33Q9H6R0 707 aaKnown RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 BMP2KQ9NSY1 1161 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
COL20A1-207ENST00000494913 RWDD3Q9Y3V2 267 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 PPME1Q9Y570 386 aa20.11■□□□□ 0.81
COL20A1-207ENST00000494913 XIRP2A4UGR9 3374 aa20.1■□□□□ 0.81
COL20A1-207ENST00000494913 POTEMA6NI47 508 aa20.1■□□□□ 0.81
COL20A1-207ENST00000494913 LINC00271P0C7V0 271 aa20.1■□□□□ 0.81
COL20A1-207ENST00000494913 U2AF2P26368 475 aaKnown RBP eCLIP20.1■□□□□ 0.81
COL20A1-207ENST00000494913 RFC5P40937 340 aa20.1■□□□□ 0.81
COL20A1-207ENST00000494913 FAM189BP81408 668 aa20.1■□□□□ 0.81
COL20A1-207ENST00000494913 TTC38Q5R3I4 469 aa20.1■□□□□ 0.81
COL20A1-207ENST00000494913 TMEM143Q96AN5 459 aa20.1■□□□□ 0.81
COL20A1-207ENST00000494913 NOL7Q9UMY1 257 aaKnown RBP20.1■□□□□ 0.81
COL20A1-207ENST00000494913 MRPL42Q9Y6G3 142 aaKnown RBP20.1■□□□□ 0.81
COL20A1-207ENST00000494913 LYPLA2O95372 231 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 TECP42680 631 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 TRAPPC10P48553 1259 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 ORC2Q13416 577 aaPredicted RBP20.09■□□□□ 0.81
COL20A1-207ENST00000494913 PTPROQ16827 1216 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 FAM102BQ5T8I3 360 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 ZNF410Q86VK4 478 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 NEK9Q8TD19 979 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 ATXN2LQ8WWM7 1075 aaKnown RBP20.09■□□□□ 0.81
COL20A1-207ENST00000494913 PRPF31Q8WWY3 499 aaKnown RBP20.09■□□□□ 0.81
COL20A1-207ENST00000494913 NLRP4Q96MN2 994 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 ATP6V0A4Q9HBG4 840 aa20.09■□□□□ 0.81
COL20A1-207ENST00000494913 C5orf67F2Z3F1 127 aa20.08■□□□□ 0.81
COL20A1-207ENST00000494913 RB1P06400 928 aa20.08■□□□□ 0.81
COL20A1-207ENST00000494913 OR52Z1P0C646 297 aa20.08■□□□□ 0.81
COL20A1-207ENST00000494913 GJB2P29033 226 aa20.08■□□□□ 0.81
COL20A1-207ENST00000494913 NBR1Q14596 966 aa20.08■□□□□ 0.81
COL20A1-207ENST00000494913 EMC2Q15006 297 aa20.08■□□□□ 0.81
COL20A1-207ENST00000494913 MRPL38Q96DV4 380 aaKnown RBP20.08■□□□□ 0.81
COL20A1-207ENST00000494913 C11orf84Q9BUA3 381 aaPredicted RBP20.08■□□□□ 0.81
COL20A1-207ENST00000494913 COL25A1Q9BXS0 654 aaPredicted RBP20.08■□□□□ 0.81
COL20A1-207ENST00000494913 INO80BQ9C086 356 aaPredicted RBP20.08■□□□□ 0.81
COL20A1-207ENST00000494913 TMEM161AQ9NX61 479 aa20.08■□□□□ 0.81
COL20A1-207ENST00000494913 COL4A3BPQ9Y5P4 624 aa20.08■□□□□ 0.81
COL20A1-207ENST00000494913 NLRC5Q86WI3 1866 aa20.08■□□□□ 0.8
COL20A1-207ENST00000494913 SPTBN5Q9NRC6 3674 aaKnown RBP20.07■□□□□ 0.8
COL20A1-207ENST00000494913 A0A087WWV3 80 aa20.07■□□□□ 0.8
COL20A1-207ENST00000494913 TBKBP1A7MCY6 615 aa20.07■□□□□ 0.8
COL20A1-207ENST00000494913 MRPS5P82675 430 aaKnown RBP20.07■□□□□ 0.8
COL20A1-207ENST00000494913 MCTP1Q6DN14 999 aa20.07■□□□□ 0.8
COL20A1-207ENST00000494913 PIGOQ8TEQ8 1089 aa20.07■□□□□ 0.8
COL20A1-207ENST00000494913 PSPC1Q8WXF1 523 aaKnown RBP20.07■□□□□ 0.8
COL20A1-207ENST00000494913 ELAC1Q9H777 363 aaKnown RBP20.07■□□□□ 0.8
COL20A1-207ENST00000494913 ANKEF1Q9NU02 776 aa20.07■□□□□ 0.8
COL20A1-207ENST00000494913 SRGAP2CP0DJJ0 459 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 SPATA31C1P0DKV0 1188 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 FGFR1P11362 822 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 SFPQP23246 707 aaKnown RBP eCLIP20.06■□□□□ 0.8
COL20A1-207ENST00000494913 TOB1P50616 345 aaPredicted RBP20.06■□□□□ 0.8
COL20A1-207ENST00000494913 TFF2Q03403 129 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 LAMTOR4Q0VGL1 99 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 TJAP1Q5JTD0 557 aa20.06■□□□□ 0.8
COL20A1-207ENST00000494913 TCP11Q8WWU5 503 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms