RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TADA2BQ86TJ2 420 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 CATSPER3Q86XQ3 398 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 BCAS4Q8TDM0 211 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 SCFD2Q8WU76 684 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 CTNNBL1Q8WYA6 563 aaPredicted RBP12.5□□□□□ -0.41
RFC4-214ENST00000494047 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 HPS3Q969F9 1004 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 FAM81BQ96LP2 452 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 NACC1Q96RE7 527 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 NUDT12Q9BQG2 462 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 PLVAPQ9BX97 442 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 STK33Q9BYT3 514 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 PARVGQ9HBI0 331 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 ARHGEF10LQ9HCE6 1279 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 EPB41L5Q9HCM4 733 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 GGA3Q9NZ52 723 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 GCNT4Q9P109 453 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 ADAMTS1Q9UHI8 967 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 NENFQ9UMX5 172 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 UTP11Q9Y3A2 253 aaKnown RBP12.5□□□□□ -0.41
RFC4-214ENST00000494047 TLL2Q9Y6L7 1015 aa12.5□□□□□ -0.41
RFC4-214ENST00000494047 ZNF536O15090 1300 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 FAM187AA6NFU0 413 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 WNT10BO00744 389 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 KCNK3O14649 394 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 PMM2O15305 246 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 MED24O75448 989 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
RFC4-214ENST00000494047 MYBL2P10244 700 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 BMP3P12645 472 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 NR1D1P20393 614 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 PON1P27169 355 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 GNGT1P63211 74 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 PTK2Q05397 1052 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 EPHA7Q15375 998 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 CST9Q5W186 159 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 IRF2BP2Q7Z5L9 587 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 USP37Q86T82 979 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 HOOK3Q86VS8 718 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 NELFCDQ8IXH7 590 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 LRRC57Q8N9N7 239 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 SEC14L1Q92503 715 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 TMEM206Q9H813 350 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 GOPCQ9HD26 462 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 SIPA1L1O43166 1804 aa12.49□□□□□ -0.41
RFC4-214ENST00000494047 BHMG1C9JSJ3 638 aaPredicted RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 NDUFAB1O14561 156 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 GCNT3O95395 438 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 GUCY2CP25092 1073 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 MATR3P43243 847 aaKnown RBP eCLIP12.48□□□□□ -0.41
RFC4-214ENST00000494047 NOP2P46087 812 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 ZNF131P52739 623 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 FKBP1BP68106 108 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 ATP2B2Q01814 1243 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 DLGAP5Q15398 846 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 ECM1Q16610 540 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 ABCB5Q2M3G0 1257 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 PRR16Q569H4 304 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 APOBEC3HQ6NTF7 200 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 KCTD1Q719H9 257 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 SAPCD2Q86UD0 394 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 FAM160B2Q86V87 743 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 APOBEC3FQ8IUX4 373 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 FAM186BQ8IYM0 893 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 C2orf69Q8N8R5 385 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 TPCN2Q8NHX9 752 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 SLC35C1Q96A29 364 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 EEF2KMTQ96G04 330 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 CCDC43Q96MW1 224 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 ZIM3Q96PE6 472 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 KRT12Q99456 494 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 EPN3Q9H201 632 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 ZHX3Q9H4I2 956 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 DDX4Q9NQI0 724 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 MAP3K20Q9NYL2 800 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 TMOD2Q9NZR1 351 aa12.48□□□□□ -0.41
RFC4-214ENST00000494047 MRPL11Q9Y3B7 192 aaKnown RBP12.48□□□□□ -0.41
RFC4-214ENST00000494047 POTEFA5A3E0 1075 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 PPP1R37O75864 691 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 KRT13P13646 458 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 SCP2P22307 547 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 SOX5P35711 763 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 STAT2P52630 851 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 DRG2P55039 364 aaKnown RBP12.47□□□□□ -0.41
RFC4-214ENST00000494047 HLTFQ14527 1009 aaKnown RBP eCLIP12.47□□□□□ -0.41
RFC4-214ENST00000494047 ARSHQ5FYA8 562 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 DCAF17Q5H9S7 520 aaPredicted RBP12.47□□□□□ -0.41
RFC4-214ENST00000494047 TCERG1LQ5VWI1 586 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 C11orf63Q6NUN7 778 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 POTEEQ6S8J3 1075 aa12.47□□□□□ -0.41
RFC4-214ENST00000494047 INTS8Q75QN2 995 aaKnown RBP12.47□□□□□ -0.41
RFC4-214ENST00000494047 NIPA1Q7RTP0 329 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms