RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 DNAJB1P25685 340 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 KLRC1P26715 233 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 CALRP27797 417 aaKnown RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 ZNF76P36508 570 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 EVCP57679 992 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 CAMK1Q14012 370 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 UGCGQ16739 394 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 TCEAL5Q5H9L2 206 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 ICE2Q659A1 982 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 SWSAP1Q6NVH7 229 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 NIPA1Q7RTP0 329 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 FBXL16Q8N461 479 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 ZNF713Q8N859 430 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 CCDC112Q8NEF3 446 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 GPT2Q8TD30 523 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 ZNF689Q96CS4 500 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 MRPL38Q96DV4 380 aaKnown RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 IL17RAQ96F46 866 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 ZNF668Q96K58 619 aaPredicted RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 EPHX3Q9H6B9 360 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 ZSWIM6Q9HCJ5 1215 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 GJB4Q9NTQ9 266 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 LMCD1Q9NZU5 365 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 PADI3Q9ULW8 664 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 PCDHGC5Q9Y5F6 944 aa9.16□□□□□ -0.94
HDAC6-234ENST00000493923 MRPL42Q9Y6G3 142 aaKnown RBP9.16□□□□□ -0.94
HDAC6-234ENST00000493923 PLXNA4Q9HCM2 1894 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 ADGRA3Q8IWK6 1321 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 IGSF9BQ9UPX0 1349 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 SMIM35A0A1B0GVV1 85 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 TMEM150BA6NC51 233 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 H3BQ06 376 aaPredicted RBP9.15□□□□□ -0.94
HDAC6-234ENST00000493923 IPO5O00410 1097 aaKnown RBP9.15□□□□□ -0.94
HDAC6-234ENST00000493923 BACH1O14867 736 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 MSH4O15457 936 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 KIF1CO43896 1103 aaKnown RBP9.15□□□□□ -0.94
HDAC6-234ENST00000493923 C22orf31O95567 290 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 IL9P15248 144 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 CIITAP33076 1130 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 CTNNB1P35222 781 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 STK3Q13188 491 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 PAN2Q504Q3 1202 aaKnown RBP9.15□□□□□ -0.94
HDAC6-234ENST00000493923 PRR16Q569H4 304 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 PDXDC2PQ6P474 469 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 RUFY3Q7L099 469 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 REXO1Q8N1G1 1221 aaKnown RBP9.15□□□□□ -0.94
HDAC6-234ENST00000493923 ATP8B4Q8TF62 1192 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 APBB2Q92870 758 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 ZNF577Q9BSK1 485 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 CELF4Q9BZC1 486 aaKnown RBP9.15□□□□□ -0.94
HDAC6-234ENST00000493923 AZI2Q9H6S1 392 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 ERVK-5Q9HDB9 667 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 ZNF302Q9NR11 478 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 COG5Q9UP83 839 aa9.15□□□□□ -0.94
HDAC6-234ENST00000493923 MUC6Q6W4X9 2439 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 KDM3AQ9Y4C1 1321 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 M0R2N6 131 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 ATP8B1O43520 1251 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 HBP1O60381 514 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 DGKIO75912 1065 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 STBD1O95210 358 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 TDP2O95551 362 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 VTNP04004 478 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 TUBB4AP04350 444 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 KCNA5P22460 613 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 CASQ1P31415 396 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 IRS1P35568 1242 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 BMPR1AP36894 532 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 LTBRP36941 435 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 CLCN3P51790 818 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 KRT76Q01546 638 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 DLX2Q07687 328 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-234ENST00000493923 KIZQ2M2Z5 673 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 CCDC183Q5T5S1 534 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 RSPH3Q86UC2 560 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 FAM228AQ86W67 206 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 FIBCD1Q8N539 461 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 LINC01465Q8N7H1 131 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 CLP1Q92989 425 aaKnown RBP9.14□□□□□ -0.95
HDAC6-234ENST00000493923 KIF2CQ99661 725 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 SH2D3AQ9BRG2 576 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 RNF26Q9BY78 433 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-234ENST00000493923 UNC45AQ9H3U1 944 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 C6orf50Q9HD87 102 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 ALG13Q9NP73 1137 aaKnown RBP9.14□□□□□ -0.95
HDAC6-234ENST00000493923 RNF19AQ9NV58 838 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 GABBR1Q9UBS5 961 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 KCNJ14Q9UNX9 436 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 GINS2Q9Y248 185 aa9.14□□□□□ -0.95
HDAC6-234ENST00000493923 MAFBQ9Y5Q3 323 aaPredicted RBP9.14□□□□□ -0.95
HDAC6-234ENST00000493923 CCDC196A0A1B0GTZ2 297 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 FAM205CA6NFA0 338 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 C5orf67F2Z3F1 127 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 LINC01565O15544 149 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 CHMP2AO43633 222 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 GPR32O75388 356 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 CTDNEP1O95476 244 aa9.13□□□□□ -0.95
HDAC6-234ENST00000493923 ADCY5O95622 1261 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms