RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 DKC1O60832 514 aaKnown RBP eCLIP7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 LYPLA2O95372 231 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 EYA4O95677 639 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 RPN1P04843 607 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 P4HBP07237 508 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 PPP1R2P41236 205 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 KCNJ6P48051 423 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 ZNF165P49910 485 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 CUL4BQ13620 913 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 ECM1Q16610 540 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 WDR78Q5VTH9 848 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 GPR142Q7Z601 462 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 MFN1Q8IWA4 741 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 TRIM9Q9C026 710 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 DNAJC25Q9H1X3 360 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 SLC5A4Q9NY91 659 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 KIAA1024Q9UPX6 916 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 DNM3Q9UQ16 869 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 MYH11P35749 1972 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 CASP8AP2Q9UKL3 1982 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 RBM47A0AV96 593 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 USP27XA6NNY8 438 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 CA12O43570 354 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 AHCYL1O43865 530 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 SLITRK3O94933 977 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 RHOBTB3O94955 611 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 PLA2G4BP0C869 781 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 ADORA2AP29274 412 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 APLP1P51693 650 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 SFSWAPQ12872 951 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 DHX8Q14562 1220 aaKnown RBP7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 TLDC1Q6P9B6 456 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 MAMDC4Q6UXC1 1216 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 CCDC50Q8IVM0 306 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 SYT2Q8N9I0 419 aaPredicted RBP7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 MRFAP1L1Q96HT8 127 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 DYDC2Q96IM9 177 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 NACC1Q96RE7 527 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 PLIN2Q99541 437 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 R3HDMLQ9H3Y0 253 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 ATP6V0A4Q9HBG4 840 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 CBX8Q9HC52 389 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 VTA1Q9NP79 307 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 BMP2KQ9NSY1 1161 aaPredicted RBP7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 KCND2Q9NZV8 630 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 FAM169AQ9Y6X4 670 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 SRCAPQ6ZRS2 3230 aa7.92□□□□□ -1.14
SMARCE1-211ENST00000493660 POTEFA5A3E0 1075 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 ANKRD65E5RJM6 399 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 IKBKBO14920 756 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 CHMP2AO43633 222 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 KLRC4O43908 158 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 ATP9AO75110 1047 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 FSBPO95073 299 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 PGK2P07205 417 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 PYGBP11216 843 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 PAX3P23760 479 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 YY1P25490 414 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 SLC12A3P55017 1021 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 DPCR1Q3MIW9 517 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 COBLL1Q53SF7 1204 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 ZNF658Q5TYW1 1059 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 POTEGQ6S5H5 508 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 C11orf57Q6ZUT1 292 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 UNC13DQ70J99 1090 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 KCNK18Q7Z418 384 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 ZNF784Q8NCA9 323 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 HNRNPLLQ8WVV9 542 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 C17orf50Q8WW18 174 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 EZH1Q92800 747 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 ZBTB10Q96DT7 871 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 AGAP3Q96P47 875 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 ZSWIM4Q9H7M6 989 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 JPH1Q9HDC5 661 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 SLC9A2Q9UBY0 812 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 NRBP1Q9UHY1 535 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 CPA4Q9UI42 421 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 DNAI1Q9UI46 699 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 SYNGAP1Q96PV0 1343 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 CCDC151A5D8V7 595 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 MYMKA6NI61 221 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 E9PMD0 336 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 BIN1O00499 593 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 EBAG9O00559 213 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 PYGLP06737 847 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 PSAPP07602 524 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 EZRP15311 586 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 ERCC5P28715 1186 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 TPP2P29144 1249 aaPredicted RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 QARSP47897 775 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 PSMC5P62195 406 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 ASIC1P78348 528 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 IQCB1Q15051 598 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 DEFB115Q30KQ5 88 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 MORN1Q5T089 497 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 HDXQ7Z353 690 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 SPATS2Q86XZ4 545 aaKnown RBP7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 TRIM42Q8IWZ5 723 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 C4orf19Q8IY42 314 aa7.91□□□□□ -1.14
SMARCE1-211ENST00000493660 OR8K1Q8NGG5 319 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms