RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 GPC3P51654 580 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 CLCN6P51797 869 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 NPEPPSP55786 919 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 NBR1Q14596 966 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 HAUS3Q68CZ6 603 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 DTHD1Q6ZMT9 781 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 SLC24A5Q71RS6 500 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 RTN4RL1Q86UN2 441 aaPredicted RBP7.79□□□□□ -1.16
TOP3A-207ENST00000493648 ZNF410Q86VK4 478 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 CATSPER3Q86XQ3 398 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 RHPN2Q8IUC4 686 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 C4orf32Q8N8J7 132 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 TMEM40Q8WWA1 233 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 TCP11Q8WWU5 503 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 ARNTL2Q8WYA1 636 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 NACC1Q96RE7 527 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 TGS1Q96RS0 853 aaKnown RBP7.79□□□□□ -1.16
TOP3A-207ENST00000493648 MTRQ99707 1265 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 ADAM2Q99965 735 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 POLR3CQ9BUI4 534 aaPredicted RBP7.79□□□□□ -1.16
TOP3A-207ENST00000493648 TSPYL2Q9H2G4 693 aaPredicted RBP7.79□□□□□ -1.16
TOP3A-207ENST00000493648 CERS4Q9HA82 394 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 RGS18Q9NS28 235 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 C1orf112Q9NSG2 853 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 WRAP73Q9P2S5 460 aaPredicted RBP7.79□□□□□ -1.16
TOP3A-207ENST00000493648 LRWD1Q9UFC0 647 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 LRFN2Q9ULH4 789 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 PCDHB7Q9Y5E2 793 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 PCDHB6Q9Y5E3 794 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 SIP14410 1827 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 PTPRSQ13332 1948 aa7.79□□□□□ -1.16
TOP3A-207ENST00000493648 A0A087WZ62 844 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 LCHNA4D1U4 455 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 ZBTB39O15060 712 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 DGAT1O75907 488 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 SRGAP2CP0DJJ0 459 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 SPATA31C1P0DKV0 1188 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 DARSP14868 501 aaKnown RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 IGFBP4P22692 258 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 RPA1P27694 616 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 PRPHP41219 470 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 SARSP49591 514 aaKnown RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 ERVK-21P61565 698 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 DRP2Q13474 957 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 MXD4Q14582 209 aaPredicted RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 BRAPQ7Z569 592 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 FAM228AQ86W67 206 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 NPAS4Q8IUM7 802 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 FIBCD1Q8N539 461 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 ZNF579Q8NAF0 562 aaKnown RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 MAFAQ8NHW3 353 aaPredicted RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 PRPF31Q8WWY3 499 aaKnown RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 PSPC1Q8WXF1 523 aaKnown RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 SNX21Q969T3 373 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 TMEM143Q96AN5 459 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 ZNF668Q96K58 619 aaPredicted RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 NLRP4Q96MN2 994 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 SAMD11Q96NU1 681 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 FDXACB1Q9BRP7 624 aaPredicted RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 TMX1Q9H3N1 280 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 DHX33Q9H6R0 707 aaKnown RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 ATP6V0A4Q9HBG4 840 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.78□□□□□ -1.16
TOP3A-207ENST00000493648 CHST12Q9NRB3 414 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 COL4A3BPQ9Y5P4 624 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 TTC3P53804 2025 aa7.78□□□□□ -1.16
TOP3A-207ENST00000493648 VPS37CA5D8V6 355 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 RBAK-RBAKDNI3L0D1 243 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 GTPBP6O43824 516 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 MED24O75448 989 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 DGKIO75912 1065 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 HSP90AA1P07900 732 aaKnown RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 SKIP12755 728 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 IBSPP21815 317 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 SFPQP23246 707 aaKnown RBP eCLIP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 CCT6AP40227 531 aaKnown RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 RARRES1P49788 294 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 FAM189BP81408 668 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 POU5F1BQ06416 359 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 NCBP1Q09161 790 aaKnown RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 LAMTOR4Q0VGL1 99 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 TFDP1Q14186 410 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 BTG3Q14201 252 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 EMC2Q15006 297 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 KRT79Q5XKE5 535 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 SRGAP1Q7Z6B7 1085 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 FERMT3Q86UX7 667 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 KSR1Q8IVT5 923 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 HSCBQ8IWL3 235 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 IGSF22Q8N9C0 903 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 SLC17A8Q8NDX2 589 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 PIGOQ8TEQ8 1089 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 LINC01599Q8WXQ3 324 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 ELAC1Q9H777 363 aaKnown RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 BMP2KQ9NSY1 1161 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 DACT1Q9NYF0 836 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 DBR1Q9UK59 544 aaKnown RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 RWDD3Q9Y3V2 267 aa7.77□□□□□ -1.17
TOP3A-207ENST00000493648 FARP1Q9Y4F1 1045 aaPredicted RBP7.77□□□□□ -1.17
TOP3A-207ENST00000493648 A0A087WWV3 80 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms