RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 NLRC5Q86WI3 1866 aa12.02□□□□□ -0.48
COL6A3-214ENST00000493608 TRANK1O15050 2925 aa12.02□□□□□ -0.48
COL6A3-214ENST00000493608 CCNT1O60563 726 aaKnown RBP12.02□□□□□ -0.49
COL6A3-214ENST00000493608 LPXNO60711 386 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 C22orf31O95567 290 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 VTNP04004 478 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 CLCN3P51790 818 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 ERVK-21P61565 698 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 PRKCEQ02156 737 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 NFX1Q12986 1120 aaKnown RBP12.02□□□□□ -0.49
COL6A3-214ENST00000493608 NR5A1Q13285 461 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 SKIV2LQ15477 1246 aaKnown RBP12.02□□□□□ -0.49
COL6A3-214ENST00000493608 KIZQ2M2Z5 673 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 NME8Q8N427 588 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 LRRC71Q8N4P6 559 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 ETNPPLQ8TBG4 499 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 LINC01599Q8WXQ3 324 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 ZNF668Q96K58 619 aaPredicted RBP12.02□□□□□ -0.49
COL6A3-214ENST00000493608 SH2D3AQ9BRG2 576 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
COL6A3-214ENST00000493608 COL4A4P53420 1690 aaPredicted RBP12.02□□□□□ -0.49
COL6A3-214ENST00000493608 COL1A2P08123 1366 aa12.02□□□□□ -0.49
COL6A3-214ENST00000493608 MYO7AQ13402 2215 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 TMEM150BA6NC51 233 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
COL6A3-214ENST00000493608 OATP04181 439 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 PAK2Q13177 524 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 C8orf34Q49A92 452 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 EFCAB12Q6NXP0 572 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 NEK8Q86SG6 692 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 FAM177A1Q8N128 213 aaPredicted RBP12.01□□□□□ -0.49
COL6A3-214ENST00000493608 TMEM40Q8WWA1 233 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 WASF1Q92558 559 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 MBOAT7Q96N66 472 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 OSMRQ99650 979 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 NRBP2Q9NSY0 501 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 NOC2LQ9Y3T9 749 aaKnown RBP12.01□□□□□ -0.49
COL6A3-214ENST00000493608 IGSF9BQ9UPX0 1349 aa12.01□□□□□ -0.49
COL6A3-214ENST00000493608 BTBD18B2RXH4 712 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 EML1O00423 815 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 RPLP2P05387 115 aaKnown RBP12□□□□□ -0.49
COL6A3-214ENST00000493608 POU3F3P20264 500 aaPredicted RBP12□□□□□ -0.49
COL6A3-214ENST00000493608 SFNP31947 248 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 KRT2P35908 639 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 JAK3P52333 1124 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 GUCY1B3Q02153 619 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 TFF2Q03403 129 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 SMYD5Q6GMV2 418 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 MOXD1Q6UVY6 613 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 CCDC83Q8IWF9 413 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 BANK1Q8NDB2 785 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 FAM167AQ96KS9 214 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 TMX1Q9H3N1 280 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 ST3GAL5Q9UNP4 418 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 AKT3Q9Y243 479 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 VCANP13611 3396 aa12□□□□□ -0.49
COL6A3-214ENST00000493608 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 MAGEB2O15479 319 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 MARCH6O60337 910 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 MGEA5O60502 916 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 GPR32O75388 356 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 RPS6KA5O75582 802 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 STBD1O95210 358 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 NLRP11P59045 1033 aaKnown RBP11.99□□□□□ -0.49
COL6A3-214ENST00000493608 MTERF2Q49AM1 385 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 EPC2Q52LR7 807 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 PPP4R3AQ6IN85 833 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 B3GNT9Q6UX72 402 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 TMEM192Q8IY95 271 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 FIBCD1Q8N539 461 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 HAS1Q92839 578 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 TNFRSF25Q93038 417 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 KIF2CQ99661 725 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 ERVK-5Q9HDB9 667 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 THEGQ9P2T0 379 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 CEP131Q9UPN4 1083 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 LIMCH1Q9UPQ0 1083 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 SQORQ9Y6N5 450 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 KDM3AQ9Y4C1 1321 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
COL6A3-214ENST00000493608 WNT7AO00755 349 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 MMP1P03956 469 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 FECHP22830 423 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 GATMP50440 423 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 CRYBB1P53674 252 aaPredicted RBP11.98□□□□□ -0.49
COL6A3-214ENST00000493608 TBC1D8BQ0IIM8 1120 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 DRP2Q13474 957 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 GPM6BQ13491 265 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 PAN2Q504Q3 1202 aaKnown RBP11.98□□□□□ -0.49
COL6A3-214ENST00000493608 LINC01465Q8N7H1 131 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 RDM1Q8NG50 284 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 ADAM2Q99965 735 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 FTHL17Q9BXU8 183 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 BRMS1Q9HCU9 246 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 KCNMB3Q9NPA1 279 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 VAV3Q9UKW4 847 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 BRWD1Q9NSI6 2320 aa11.98□□□□□ -0.49
COL6A3-214ENST00000493608 DENND3A2RUS2 1198 aa11.97□□□□□ -0.49
COL6A3-214ENST00000493608 CSDE1O75534 798 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms