RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 TLR9Q9NR96 1032 aa18.73■□□□□ 0.59
PTPRU-208ENST00000493601 FSD2A1L4K1 749 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 PRR33A8MZF0 331 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 M0R2N6 131 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 DCXO43602 365 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 FGF18O76093 207 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 TDP2O95551 362 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 FGFR1P11362 822 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 ZSCAN20P17040 1043 aaPredicted RBP18.72■□□□□ 0.59
PTPRU-208ENST00000493601 NRIP1P48552 1158 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 GPC3P51654 580 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 STK3Q13188 491 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 NONOQ15233 471 aaKnown RBP eCLIP18.72■□□□□ 0.59
PTPRU-208ENST00000493601 GJA10Q969M2 543 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 TMEM117Q9H0C3 514 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 PDRG1Q9NUG6 133 aa18.72■□□□□ 0.59
PTPRU-208ENST00000493601 TYW1Q9NV66 732 aaKnown RBP18.72■□□□□ 0.59
PTPRU-208ENST00000493601 SEPT9Q9UHD8 586 aaPredicted RBP18.72■□□□□ 0.59
PTPRU-208ENST00000493601 CDKL5O76039 1030 aa18.71■□□□□ 0.59
PTPRU-208ENST00000493601 PDE12Q6L8Q7 609 aaKnown RBP18.71■□□□□ 0.59
PTPRU-208ENST00000493601 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
PTPRU-208ENST00000493601 ABI1Q8IZP0 508 aa18.71■□□□□ 0.59
PTPRU-208ENST00000493601 LRRC43Q8N309 656 aa18.71■□□□□ 0.59
PTPRU-208ENST00000493601 ETNPPLQ8TBG4 499 aa18.71■□□□□ 0.59
PTPRU-208ENST00000493601 MICAL1Q8TDZ2 1067 aa18.71■□□□□ 0.59
PTPRU-208ENST00000493601 NLRP7Q8WX94 980 aa18.71■□□□□ 0.59
PTPRU-208ENST00000493601 MSLNLQ96KJ4 702 aa18.71■□□□□ 0.59
PTPRU-208ENST00000493601 LARP6Q9BRS8 491 aaKnown RBP18.71■□□□□ 0.59
PTPRU-208ENST00000493601 EYA4O95677 639 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 DARSP14868 501 aaKnown RBP18.7■□□□□ 0.58
PTPRU-208ENST00000493601 CDC42EP1Q00587 391 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 COASYQ13057 564 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 TARBP2Q15633 366 aaKnown RBP18.7■□□□□ 0.58
PTPRU-208ENST00000493601 NPY5RQ15761 445 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 XKR3Q5GH77 459 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 RBM23Q86U06 439 aaKnown RBP18.7■□□□□ 0.58
PTPRU-208ENST00000493601 SMRP1Q8NCR6 262 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 MBOAT7Q96N66 472 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 NIFKQ9BYG3 293 aaKnown RBP18.7■□□□□ 0.58
PTPRU-208ENST00000493601 CWH43Q9H720 699 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 TLE6Q9H808 572 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 HCSTQ9UBK5 93 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 DDX25Q9UHL0 483 aaKnown RBP18.7■□□□□ 0.58
PTPRU-208ENST00000493601 LZTS1Q9Y250 596 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 TRIOO75962 3097 aa18.7■□□□□ 0.58
PTPRU-208ENST00000493601 PPM1AP35813 382 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 DNM2P50570 870 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 MTERF2Q49AM1 385 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 B3GNT9Q6UX72 402 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 ECHDC2Q86YB7 292 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 ZNF668Q96K58 619 aaPredicted RBP18.69■□□□□ 0.58
PTPRU-208ENST00000493601 AIFM3Q96NN9 605 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 CASD1Q96PB1 797 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 CDCA3Q99618 268 aaPredicted RBP18.69■□□□□ 0.58
PTPRU-208ENST00000493601 DACT1Q9NYF0 836 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 CLEC1BQ9P126 229 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 PCDHGC5Q9Y5F6 944 aa18.69■□□□□ 0.58
PTPRU-208ENST00000493601 GLP2RO95838 553 aa18.68■□□□□ 0.58
PTPRU-208ENST00000493601 NEFLP07196 543 aa18.68■□□□□ 0.58
PTPRU-208ENST00000493601 XBP1P17861 261 aa18.68■□□□□ 0.58
PTPRU-208ENST00000493601 INF2Q27J81 1249 aa18.68■□□□□ 0.58
PTPRU-208ENST00000493601 ZNF558Q96NG5 402 aa18.68■□□□□ 0.58
PTPRU-208ENST00000493601 PHF20Q9BVI0 1012 aa18.68■□□□□ 0.58
PTPRU-208ENST00000493601 GCOM2Q9BZD3 368 aaPredicted RBP18.68■□□□□ 0.58
PTPRU-208ENST00000493601 RNF19AQ9NV58 838 aa18.68■□□□□ 0.58
PTPRU-208ENST00000493601 PUF60Q9UHX1 559 aaKnown RBP18.68■□□□□ 0.58
PTPRU-208ENST00000493601 BARX2Q9UMQ3 279 aaPredicted RBP18.68■□□□□ 0.58
PTPRU-208ENST00000493601 STK36Q9NRP7 1315 aa18.68■□□□□ 0.58
PTPRU-208ENST00000493601 A0A0U1RQF3 1178 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 CCDC194A0A1B0GVG4 234 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 FSCN2O14926 492 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 EOMESO95936 686 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 SRGAP2BP0DMP2 458 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 GCFC2P16383 781 aaKnown RBP18.67■□□□□ 0.58
PTPRU-208ENST00000493601 SFPQP23246 707 aaKnown RBP eCLIP18.67■□□□□ 0.58
PTPRU-208ENST00000493601 PSMC5P62195 406 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 PLCB3Q01970 1234 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 LETM2Q2VYF4 491 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 RNF169Q8NCN4 708 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 MRPS27Q92552 414 aaKnown RBP18.67■□□□□ 0.58
PTPRU-208ENST00000493601 CEP89Q96ST8 783 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 SLKQ9H2G2 1235 aaPredicted RBP18.67■□□□□ 0.58
PTPRU-208ENST00000493601 KCNJ14Q9UNX9 436 aa18.67■□□□□ 0.58
PTPRU-208ENST00000493601 IGKV6-21A0A0C4DH24 114 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 TMEM150BA6NC51 233 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 DDX11L8A8MPP1 907 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 SLC37A4O43826 429 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 FGFR4P22455 802 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 SCRN1Q12765 414 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 PPP2R5CQ13362 524 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 DRP2Q13474 957 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 DUSP6Q16828 381 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 CLLU1OSQ5K130 101 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 KCNT2Q6UVM3 1135 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 LRRC55Q6ZSA7 311 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 NEK8Q86SG6 692 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 ZNF410Q86VK4 478 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 RSPH1Q8WYR4 309 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 FAM20AQ96MK3 541 aa18.66■□□□□ 0.58
PTPRU-208ENST00000493601 NAP1L4Q99733 375 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms