RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 RAB34Q9BZG1 259 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 ETAA1Q9NY74 926 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 SEC63Q9UGP8 760 aaKnown RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 KIAA1024Q9UPX6 916 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 CCDC88AQ3V6T2 1871 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 CASZ1Q86V15 1759 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 H0Y3Z8 333 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 DDX3YO15523 660 aaKnown RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 EDIL3O43854 480 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 HIP1RO75146 1068 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 SNUPNO95149 360 aaKnown RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 ACSL3O95573 720 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 PCK1P35558 622 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 TNNI2P48788 182 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 FXR2P51116 673 aaKnown RBP eCLIP9.03□□□□□ -0.96
GBP3-208ENST00000493594 CASP5P51878 434 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 MAPK7Q13164 816 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 RBBP5Q15291 538 aaKnown RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 SPTY2D1Q68D10 685 aaPredicted RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 DPY19L2P1Q6NXN4 242 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 FAM43BQ6ZT52 329 aaPredicted RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 TAOK1Q7L7X3 1001 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 SPATA21Q7Z572 469 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 ARHGEF2Q92974 986 aaKnown RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 LRRC27Q9C0I9 530 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 KCTD10Q9H3F6 313 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 CCDC134Q9H6E4 229 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 GRHL1Q9NZI5 618 aa9.03□□□□□ -0.96
GBP3-208ENST00000493594 ARMCX3Q9UH62 379 aaPredicted RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 CHORDC1Q9UHD1 332 aaPredicted RBP9.03□□□□□ -0.96
GBP3-208ENST00000493594 IGSF9BQ9UPX0 1349 aa9.02□□□□□ -0.96
GBP3-208ENST00000493594 SPDYE5A6NIY4 337 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 ERVV-1B6SEH8 477 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 MAP3K13O43283 966 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 RIPK2O43353 540 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 OAS1P00973 400 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 AFPP02771 609 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 PECAM1P16284 738 aaPredicted RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 TUBP50607 506 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 EVA1CP58658 441 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 PLS1Q14651 629 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 SPDYCQ5MJ68 293 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 C12orf60Q5U649 245 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 SLC30A9Q6PML9 568 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 SEPT14Q6ZU15 432 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 KSR1Q8IVT5 923 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 LNX1Q8TBB1 728 aaPredicted RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 TBC1D16Q8TBP0 767 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 ALG3Q92685 438 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 CRAMP1Q96RY5 1269 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 DDX23Q9BUQ8 820 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 PIDD1Q9HB75 910 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 CTNNAL1Q9UBT7 734 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 SAP30BPQ9UHR5 308 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 NIP7Q9Y221 180 aaKnown RBP eCLIP9.02□□□□□ -0.97
GBP3-208ENST00000493594 ARL2BPQ9Y2Y0 163 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 CACNA1SQ13698 1873 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 TMEM110-MUSTN1A8MSY1 372 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 ANKRD63C9JTQ0 380 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 XRCC5P13010 732 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 KCNJ1P48048 391 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 RAD23BP54727 409 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 RWDD2BP57060 319 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 MGAT5Q09328 741 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 PDIA5Q14554 519 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 SBK1Q52WX2 424 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 ANO7Q6IWH7 933 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 FAM47EQ6ZV65 393 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 ASRGL1Q7L266 308 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 GPBP1Q86WP2 473 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 CCDC65Q8IXS2 484 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 GBP7Q8N8V2 638 aaPredicted RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 SH3RF3Q8TEJ3 882 aaPredicted RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 UTP4Q969X6 686 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 ARHGEF26Q96DR7 871 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 TMEM237Q96Q45 408 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 TSC22D3Q99576 134 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 RXFP1Q9HBX9 757 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 PAPOLBQ9NRJ5 636 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 DNAJC17Q9NVM6 304 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 MTRF1LQ9UGC7 380 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 CNOT7Q9UIV1 285 aaKnown RBP9.02□□□□□ -0.97
GBP3-208ENST00000493594 PCDHA2Q9Y5H9 948 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 SLIT2O94813 1529 aa9.02□□□□□ -0.97
GBP3-208ENST00000493594 DLEC1Q9Y238 1755 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 IRF6O14896 467 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 CLIC2O15247 247 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 LUC7L3O95232 432 aaKnown RBP9.01□□□□□ -0.97
GBP3-208ENST00000493594 GNAT1P11488 350 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 NEFHP12036 1026 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 PRKCIP41743 596 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 CASP4P49662 377 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 PAPOLAP51003 745 aaKnown RBP9.01□□□□□ -0.97
GBP3-208ENST00000493594 MXRA7P84157 204 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 MPP2Q14168 576 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 SEPT2Q15019 361 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 TNIP1Q15025 636 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 UBE2SQ16763 222 aa9.01□□□□□ -0.97
GBP3-208ENST00000493594 TMEM119Q4V9L6 283 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms