RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 UBE2ZQ9H832 354 aaPredicted RBP12.89□□□□□ -0.35
LRTM1-202ENST00000493075 ATP6V0A4Q9HBG4 840 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 PLAGL2Q9UPG8 496 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 MRPL42Q9Y6G3 142 aaKnown RBP12.89□□□□□ -0.35
LRTM1-202ENST00000493075 MYO9BQ13459 2157 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 VCANP13611 3396 aa12.89□□□□□ -0.35
LRTM1-202ENST00000493075 GRM6O15303 877 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 JAK2O60674 1132 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 KCNQ1P51787 676 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 SPIRE1Q08AE8 756 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 ST3GAL1Q11201 340 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 LEXMQ3ZCV2 418 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 OTUD6AQ7L8S5 288 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 ZNF410Q86VK4 478 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 DIS3L2Q8IYB7 885 aaKnown RBP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 INO80BQ9C086 356 aaPredicted RBP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 CYP26B1Q9NR63 512 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 CHST12Q9NRB3 414 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 PRRC2BQ5JSZ5 2229 aaKnown RBP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 TMEM150BA6NC51 233 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 HOXA2O43364 376 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 EOMESO95936 686 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 DRP2Q13474 957 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 SAFBQ15424 915 aaKnown RBP eCLIP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 PUS10Q3MIT2 529 aaKnown RBP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 C8orf34Q49A92 452 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 PAN2Q504Q3 1202 aaKnown RBP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 TCEAL5Q5H9L2 206 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 FAM102BQ5T8I3 360 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 SPPL3Q8TCT6 385 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 NLRP7Q8WX94 980 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 KIF2CQ99661 725 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 TRAIPQ9BWF2 469 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 ZSWIM4Q9H7M6 989 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 AAASQ9NRG9 546 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
LRTM1-202ENST00000493075 PCDHA12Q9UN75 941 aa12.88□□□□□ -0.35
LRTM1-202ENST00000493075 TTC3P53804 2025 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 SPTBN5Q9NRC6 3674 aaKnown RBP12.87□□□□□ -0.35
LRTM1-202ENST00000493075 A0A0U1RQF3 1178 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 TBKBP1A7MCY6 615 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 GAS2O43903 313 aaKnown RBP12.87□□□□□ -0.35
LRTM1-202ENST00000493075 SLITRK3O94933 977 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 LYPLA2O95372 231 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
LRTM1-202ENST00000493075 RFC5P40937 340 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
LRTM1-202ENST00000493075 GATMP50440 423 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 HMGN5P82970 282 aaKnown RBP12.87□□□□□ -0.35
LRTM1-202ENST00000493075 UBE3AQ05086 875 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 CALCRLQ16602 461 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 CSPP1Q1MSJ5 1256 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 ECHDC2Q86YB7 292 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 KLHL23Q8NBE8 558 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 SLC7A3Q8WY07 619 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 CEP170P1Q96L14 293 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 SCLT1Q96NL6 688 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 HSD17B14Q9BPX1 270 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 LXNQ9BS40 222 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 TMEM117Q9H0C3 514 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 DHX33Q9H6R0 707 aaKnown RBP12.87□□□□□ -0.35
LRTM1-202ENST00000493075 ALG13Q9NP73 1137 aaKnown RBP12.87□□□□□ -0.35
LRTM1-202ENST00000493075 DACT1Q9NYF0 836 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 WRAP73Q9P2S5 460 aaPredicted RBP12.87□□□□□ -0.35
LRTM1-202ENST00000493075 PCDHB12Q9Y5F1 795 aa12.87□□□□□ -0.35
LRTM1-202ENST00000493075 SIP14410 1827 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 A0A087WZ62 844 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 ASAP2O43150 1006 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 ITGB1P05556 798 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 KCNA5P22460 613 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 SFPQP23246 707 aaKnown RBP eCLIP12.86□□□□□ -0.35
LRTM1-202ENST00000493075 NPEPPSP55786 919 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 CAMK1Q14012 370 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 CTC1Q2NKJ3 1217 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 NCAPH2Q6IBW4 605 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.86□□□□□ -0.35
LRTM1-202ENST00000493075 RSPH1Q8WYR4 309 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 DYDC2Q96IM9 177 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 ZNF668Q96K58 619 aaPredicted RBP12.86□□□□□ -0.35
LRTM1-202ENST00000493075 FDXACB1Q9BRP7 624 aaPredicted RBP12.86□□□□□ -0.35
LRTM1-202ENST00000493075 TYW1Q9NV66 732 aaKnown RBP12.86□□□□□ -0.35
LRTM1-202ENST00000493075 RGL1Q9NZL6 768 aa12.86□□□□□ -0.35
LRTM1-202ENST00000493075 XIRP2A4UGR9 3374 aa12.85□□□□□ -0.35
LRTM1-202ENST00000493075 CUL9Q8IWT3 2517 aa12.85□□□□□ -0.35
LRTM1-202ENST00000493075 NEMFO60524 1076 aa12.85□□□□□ -0.35
LRTM1-202ENST00000493075 FGFR1P11362 822 aa12.85□□□□□ -0.35
LRTM1-202ENST00000493075 SKIP12755 728 aa12.85□□□□□ -0.35
LRTM1-202ENST00000493075 XRCC6P12956 609 aaKnown RBP eCLIP12.85□□□□□ -0.35
LRTM1-202ENST00000493075 POLGP54098 1239 aaPredicted RBP12.85□□□□□ -0.35
LRTM1-202ENST00000493075 ORC2Q13416 577 aaPredicted RBP12.85□□□□□ -0.35
LRTM1-202ENST00000493075 ZNF598Q86UK7 904 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms