RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PPP6R2O75170 966 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 YEATS4O95619 227 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 EYA4O95677 639 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 CD52P31358 61 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 KCNJ6P48051 423 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 NUCB2P80303 420 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 TCTN1Q2MV58 587 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 ODR4Q5SWX8 454 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 HYIQ5T013 277 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 RASIP1Q5U651 963 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 KSR1Q8IVT5 923 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 KCTD17Q8N5Z5 321 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 PRPF31Q8WWY3 499 aaKnown RBP15.54■□□□□ 0.08
CCM2-217ENST00000492883 NLRP4Q96MN2 994 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 PNMA5Q96PV4 448 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 GCOM2Q9BZD3 368 aaPredicted RBP15.54■□□□□ 0.08
CCM2-217ENST00000492883 ADAMTS10Q9H324 1103 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 XPNPEP1Q9NQW7 623 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 PADI3Q9ULW8 664 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 NOC2LQ9Y3T9 749 aaKnown RBP15.54■□□□□ 0.08
CCM2-217ENST00000492883 COL4A3BPQ9Y5P4 624 aa15.54■□□□□ 0.08
CCM2-217ENST00000492883 MORC2Q9Y6X9 1032 aaPredicted RBP15.54■□□□□ 0.08
CCM2-217ENST00000492883 LTBP2Q14767 1821 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 A0A087WZ62 844 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 SSBP05455 408 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCM2-217ENST00000492883 SRGAP2CP0DJJ0 459 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 CYP11B2P19099 503 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 NCLP19338 710 aaKnown RBP15.53■□□□□ 0.08
CCM2-217ENST00000492883 EIF4BP23588 611 aaKnown RBP15.53■□□□□ 0.08
CCM2-217ENST00000492883 TXLNAP40222 546 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 GRB10Q13322 594 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 MXD4Q14582 209 aaPredicted RBP15.53■□□□□ 0.08
CCM2-217ENST00000492883 ZNF410Q86VK4 478 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 MCPH1Q8NEM0 835 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 TMEM40Q8WWA1 233 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 EPSTI1Q96J88 318 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 FDXACB1Q9BRP7 624 aaPredicted RBP15.53■□□□□ 0.08
CCM2-217ENST00000492883 CCSER1Q9C0I3 900 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 CCDC39Q9UFE4 941 aa15.53■□□□□ 0.08
CCM2-217ENST00000492883 ATP2A2P16615 1042 aaKnown RBP15.52■□□□□ 0.08
CCM2-217ENST00000492883 ARL2P36404 184 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 WDR5P61964 334 aaKnown RBP15.52■□□□□ 0.08
CCM2-217ENST00000492883 LAMTOR4Q0VGL1 99 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 TFDP1Q14186 410 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 KARSQ15046 597 aaKnown RBP15.52■□□□□ 0.08
CCM2-217ENST00000492883 FAM102BQ5T8I3 360 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 KCNK18Q7Z418 384 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 RNF149Q8NC42 400 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 PHOSPHO2Q8TCD6 241 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 KCNG4Q8TDN1 519 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 SYMPKQ92797 1274 aaKnown RBP15.52■□□□□ 0.08
CCM2-217ENST00000492883 SLC9A7Q96T83 725 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 FTHL17Q9BXU8 183 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 INO80BQ9C086 356 aaPredicted RBP15.52■□□□□ 0.08
CCM2-217ENST00000492883 POLR3FQ9H1D9 316 aaPredicted RBP15.52■□□□□ 0.08
CCM2-217ENST00000492883 ST3GAL5Q9UNP4 418 aa15.52■□□□□ 0.08
CCM2-217ENST00000492883 GRXCR1A8MXD5 290 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 CSDE1O75534 798 aaKnown RBP15.51■□□□□ 0.07
CCM2-217ENST00000492883 AMHP03971 560 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 PLA2G4BP0C869 781 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 DARSP14868 501 aaKnown RBP15.51■□□□□ 0.07
CCM2-217ENST00000492883 ME1P48163 572 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 KRT85P78386 507 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 TMEM119Q4V9L6 283 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
CCM2-217ENST00000492883 USP49Q70CQ1 688 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 FAM228AQ86W67 206 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 ERVK-5Q9HDB9 667 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 GPRC5CQ9NQ84 441 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 PDE4DIPQ5VU43 2346 aa15.51■□□□□ 0.07
CCM2-217ENST00000492883 SOX1O00570 391 aaPredicted RBP15.5■□□□□ 0.07
CCM2-217ENST00000492883 ENPP3O14638 875 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 CUTAO60888 179 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 PLCG1P19174 1290 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 FGFR4P22455 802 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 SMAD3P84022 425 aaKnown RBP15.5■□□□□ 0.07
CCM2-217ENST00000492883 DHX8Q14562 1220 aaKnown RBP15.5■□□□□ 0.07
CCM2-217ENST00000492883 RRAGBQ5VZM2 374 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 FAM109BQ6ICB4 259 aaPredicted RBP15.5■□□□□ 0.07
CCM2-217ENST00000492883 MYOCDQ8IZQ8 938 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 SYT2Q8N9I0 419 aaPredicted RBP15.5■□□□□ 0.07
CCM2-217ENST00000492883 ASAP3Q8TDY4 903 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 ZBED2Q9BTP6 218 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 POLD4Q9HCU8 107 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 RCOR1Q9UKL0 485 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 DNAH12Q6ZR08 3092 aa15.5■□□□□ 0.07
CCM2-217ENST00000492883 DENND3A2RUS2 1198 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 UPP2O95045 317 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 ZSCAN20P17040 1043 aaPredicted RBP15.49■□□□□ 0.07
CCM2-217ENST00000492883 SFPQP23246 707 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCM2-217ENST00000492883 GLRA2P23416 452 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 DDIT3P35638 169 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 PHKA2P46019 1235 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 RABGGTBP53611 331 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 DEFB103AP81534 67 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 RINT1Q6NUQ1 792 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 FAM43BQ6ZT52 329 aaPredicted RBP15.49■□□□□ 0.07
CCM2-217ENST00000492883 SRGAP1Q7Z6B7 1085 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 HERC6Q8IVU3 1022 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 CHAMP1Q96JM3 812 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms