RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 COL9A3Q14050 684 aaPredicted RBP12.48□□□□□ -0.41
SND1-215ENST00000492772 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
SND1-215ENST00000492772 RTN1Q16799 776 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 CREB3L3Q68CJ9 461 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 MCTP2Q6DN12 878 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 LRRC55Q6ZSA7 311 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 ECHDC2Q86YB7 292 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 RSPH1Q8WYR4 309 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 LRRC2Q9BYS8 371 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 POMKQ9H5K3 350 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 DZANK1Q9NVP4 752 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 AKT3Q9Y243 479 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 MYO15AQ9UKN7 3530 aa12.48□□□□□ -0.41
SND1-215ENST00000492772 CARNS1A5YM72 827 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 C2orf71A6NGG8 1288 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 C2CD4DB7Z1M9 353 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 ZBTB43O43298 467 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 BRD1O95696 1058 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 CYP3A4P08684 503 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 PBX3P40426 434 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 CLCN3P51790 818 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 NLRP11P59045 1033 aaKnown RBP12.47□□□□□ -0.41
SND1-215ENST00000492772 FUT2Q10981 343 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 CLLU1OSQ5K130 101 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 SLC39A11Q8N1S5 342 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 MRPL43Q8N983 215 aaKnown RBP12.47□□□□□ -0.41
SND1-215ENST00000492772 TDRD5Q8NAT2 981 aaKnown RBP12.47□□□□□ -0.41
SND1-215ENST00000492772 CRYGNQ8WXF5 182 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 ZNF577Q9BSK1 485 aa12.47□□□□□ -0.41
SND1-215ENST00000492772 PRR23AA6NEV1 266 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 CLASP2O75122 1294 aaKnown RBP12.46□□□□□ -0.41
SND1-215ENST00000492772 EOMESO95936 686 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 EIF4BP23588 611 aaKnown RBP12.46□□□□□ -0.41
SND1-215ENST00000492772 CA8P35219 290 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 NBL1P41271 181 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 NECTIN1Q15223 517 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 RNF20Q5VTR2 975 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 KIAA1841Q6NSI8 718 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 ZDHHC14Q8IZN3 488 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 LINC01465Q8N7H1 131 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 TMEM105Q8N8V8 129 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 RNF169Q8NCN4 708 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 TMEM169Q96HH4 297 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 SCLT1Q96NL6 688 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 ADAMTS10Q9H324 1103 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 DACT1Q9NYF0 836 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 GABBR1Q9UBS5 961 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 PCDHA10Q9Y5I2 948 aa12.46□□□□□ -0.41
SND1-215ENST00000492772 V9GY48 417 aaPredicted RBP12.46□□□□□ -0.41
SND1-215ENST00000492772 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 A0A0U1RQF3 1178 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 GOLGA8AA7E2F4 631 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 GOLGA8BA8MQT2 603 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 WDR64B1ANS9 1081 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 ALDH7A1P49419 539 aaKnown RBP12.45□□□□□ -0.42
SND1-215ENST00000492772 RCAN1P53805 252 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 GIT2Q14161 759 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 RARS2Q5T160 578 aaKnown RBP12.45□□□□□ -0.42
SND1-215ENST00000492772 JAKMIP3Q5VZ66 844 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
SND1-215ENST00000492772 EFCAB12Q6NXP0 572 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 ZNF598Q86UK7 904 aaKnown RBP12.45□□□□□ -0.42
SND1-215ENST00000492772 REXO1Q8N1G1 1221 aaKnown RBP12.45□□□□□ -0.42
SND1-215ENST00000492772 PLCD3Q8N3E9 789 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 TMEM87AQ8NBN3 555 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 HELQQ8TDG4 1101 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 CCDC12Q8WUD4 166 aaPredicted RBP12.45□□□□□ -0.42
SND1-215ENST00000492772 ZBP1Q9H171 429 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 MFSD1Q9H3U5 465 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 CDH22Q9UJ99 828 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 USTQ9Y2C2 406 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 SAMM50Q9Y512 469 aa12.45□□□□□ -0.42
SND1-215ENST00000492772 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.44□□□□□ -0.42
SND1-215ENST00000492772 OATP04181 439 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 DARSP14868 501 aaKnown RBP12.44□□□□□ -0.42
SND1-215ENST00000492772 METAP2P50579 478 aaKnown RBP eCLIP12.44□□□□□ -0.428e-11■■■□□ 15.2
SND1-215ENST00000492772 GPC3P51654 580 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 CLCN5P51795 746 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 POLGP54098 1239 aaPredicted RBP12.44□□□□□ -0.42
SND1-215ENST00000492772 BCAR1P56945 870 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 PFKFB3Q16875 520 aaPredicted RBP12.44□□□□□ -0.42
SND1-215ENST00000492772 ATAT1Q5SQI0 421 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 ASCL5Q7RTU5 278 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 TRMT1LQ7Z2T5 733 aaKnown RBP12.44□□□□□ -0.42
SND1-215ENST00000492772 LRRC71Q8N4P6 559 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 C6orf50Q9HD87 102 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 NRBP2Q9NSY0 501 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 DBR1Q9UK59 544 aaKnown RBP12.44□□□□□ -0.42
SND1-215ENST00000492772 BRPF3Q9ULD4 1205 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 IRAK3Q9Y616 596 aa12.44□□□□□ -0.42
SND1-215ENST00000492772 MYO10Q9HD67 2058 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 ZC3H11AO75152 810 aaKnown RBP eCLIP12.43□□□□□ -0.42
SND1-215ENST00000492772 CXCL14O95715 111 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 ASGR2P07307 311 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 CDC42EP1Q00587 391 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 PRKCEQ02156 737 aa12.43□□□□□ -0.42
SND1-215ENST00000492772 TBC1D8BQ0IIM8 1120 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms