RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 DSC3Q14574 896 aa26.52■■□□□ 1.84
CTDSP1-211ENST00000492545 CALCRLQ16602 461 aa26.52■■□□□ 1.84
CTDSP1-211ENST00000492545 NLRP7Q8WX94 980 aa26.52■■□□□ 1.84
CTDSP1-211ENST00000492545 P2RX5Q93086 422 aa26.52■■□□□ 1.84
CTDSP1-211ENST00000492545 C8orf76Q96K31 380 aa26.52■■□□□ 1.84
CTDSP1-211ENST00000492545 INO80BQ9C086 356 aaPredicted RBP26.52■■□□□ 1.84
CTDSP1-211ENST00000492545 ZSWIM4Q9H7M6 989 aa26.52■■□□□ 1.84
CTDSP1-211ENST00000492545 TMEM161AQ9NX61 479 aa26.52■■□□□ 1.84
CTDSP1-211ENST00000492545 NEMFO60524 1076 aa26.51■■□□□ 1.83
CTDSP1-211ENST00000492545 SPIRE1Q08AE8 756 aa26.51■■□□□ 1.83
CTDSP1-211ENST00000492545 RABEP1Q15276 862 aa26.51■■□□□ 1.83
CTDSP1-211ENST00000492545 ZNF410Q86VK4 478 aa26.51■■□□□ 1.83
CTDSP1-211ENST00000492545 SLC7A3Q8WY07 619 aa26.51■■□□□ 1.83
CTDSP1-211ENST00000492545 UPF2Q9HAU5 1272 aaKnown RBP26.51■■□□□ 1.83
CTDSP1-211ENST00000492545 LOXHD1Q8IVV2 1947 aa26.51■■□□□ 1.83
CTDSP1-211ENST00000492545 RFC5P40937 340 aa26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 NCAPH2Q6IBW4 605 aa26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 NEK9Q8TD19 979 aa26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 CEP170P1Q96L14 293 aa26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 LXNQ9BS40 222 aa26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 FOXP1Q9H334 677 aaPredicted RBP26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 ATP6V0A4Q9HBG4 840 aa26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 SUCLA2Q9P2R7 463 aaPredicted RBP26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 MRPL42Q9Y6G3 142 aaKnown RBP26.5■■□□□ 1.83
CTDSP1-211ENST00000492545 NCOR1O75376 2440 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 TMEM150BA6NC51 233 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 HOXA2O43364 376 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 GAS2O43903 313 aaKnown RBP26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 BMP1P13497 986 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 YWHABP31946 246 aaKnown RBP26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 TFF2Q03403 129 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 FAM184AQ8NB25 1140 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 FBXO18Q8NFZ0 1043 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 CHST12Q9NRB3 414 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 DACT1Q9NYF0 836 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 XIRP2A4UGR9 3374 aa26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 COL4A4P53420 1690 aaPredicted RBP26.49■■□□□ 1.83
CTDSP1-211ENST00000492545 NCK2O43639 380 aa26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 ST18O60284 1047 aa26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 FOSBP53539 338 aa26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 ORC2Q13416 577 aaPredicted RBP26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 DRP2Q13474 957 aa26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 MTMR9Q96QG7 549 aa26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 SH2D3AQ9BRG2 576 aa26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 NSUN3Q9H649 340 aaKnown RBP26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 DHX33Q9H6R0 707 aaKnown RBP26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 TTC12Q9H892 705 aaPredicted RBP26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 AAASQ9NRG9 546 aa26.48■■□□□ 1.83
CTDSP1-211ENST00000492545 RALGAPA2Q2PPJ7 1873 aa26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 SLITRK3O94933 977 aa26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 LYPLA2O95372 231 aa26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 POLGP54098 1239 aaPredicted RBP26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 PLA2G4FQ68DD2 849 aa26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 ADAMTS19Q8TE59 1207 aa26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 HSD17B14Q9BPX1 270 aa26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 RGL1Q9NZL6 768 aa26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 WRAP73Q9P2S5 460 aaPredicted RBP26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 PLAGL2Q9UPG8 496 aa26.47■■□□□ 1.83
CTDSP1-211ENST00000492545 SFPQP23246 707 aaKnown RBP eCLIP26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 NPEPPSP55786 919 aa26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 CSPP1Q1MSJ5 1256 aa26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 PAN2Q504Q3 1202 aaKnown RBP26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 RHPN2Q8IUC4 686 aa26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 TPH2Q8IWU9 490 aa26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 TCP11Q8WWU5 503 aa26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 DYDC2Q96IM9 177 aa26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 EIF2AK1Q9BQI3 630 aaKnown RBP26.46■■□□□ 1.83
CTDSP1-211ENST00000492545 A0A087WZ62 844 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 A0A0U1RQF3 1178 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 TBKBP1A7MCY6 615 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 GRM6O15303 877 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 ASAP2O43150 1006 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 EOMESO95936 686 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 TXKP42681 527 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 GUCY1B3Q02153 619 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 FAM102BQ5T8I3 360 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 PSPC1Q8WXF1 523 aaKnown RBP26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 RSPH1Q8WYR4 309 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 ZNF668Q96K58 619 aaPredicted RBP26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 FDXACB1Q9BRP7 624 aaPredicted RBP26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 TRAIPQ9BWF2 469 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 TMEM117Q9H0C3 514 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 UBE2ZQ9H832 354 aaPredicted RBP26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 PCDHB12Q9Y5F1 795 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 BRWD1Q9NSI6 2320 aa26.45■■□□□ 1.82
CTDSP1-211ENST00000492545 SPTBN5Q9NRC6 3674 aaKnown RBP26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 IBSPP21815 317 aaPredicted RBP26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 TRAPPC10P48553 1259 aa26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 CYP4A11Q02928 519 aa26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 CTTNQ14247 550 aaKnown RBP26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 ECHDC2Q86YB7 292 aa26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 UHRF1Q96T88 793 aaPredicted RBP26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 ANKEF1Q9NU02 776 aa26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 KIF3AQ9Y496 699 aa26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 COL4A3BPQ9Y5P4 624 aa26.44■■□□□ 1.82
CTDSP1-211ENST00000492545 TNFRSF10AO00220 468 aa26.43■■□□□ 1.82
CTDSP1-211ENST00000492545 SKIP12755 728 aa26.43■■□□□ 1.82
CTDSP1-211ENST00000492545 XRCC6P12956 609 aaKnown RBP eCLIP26.43■■□□□ 1.82
CTDSP1-211ENST00000492545 GATMP50440 423 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms