RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 PSMC5P62195 406 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 PPP2R5CQ13362 524 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 DSC3Q14574 896 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 NAALADL2Q58DX5 795 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 SPOUT1Q5T280 376 aaKnown RBP9.28□□□□□ -0.92
LSM2-213ENST00000491421 KLHL23Q8NBE8 558 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 P2RX5Q93086 422 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 PABPC5Q96DU9 382 aaKnown RBP9.28□□□□□ -0.92
LSM2-213ENST00000491421 SH2D3AQ9BRG2 576 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 TMEM161AQ9NX61 479 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 VAV3Q9UKW4 847 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 PLAGL2Q9UPG8 496 aa9.28□□□□□ -0.92
LSM2-213ENST00000491421 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 H3BQ06 376 aaPredicted RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 HOXA2O43364 376 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 NCK2O43639 380 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 JAK2O60674 1132 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 DKC1O60832 514 aaKnown RBP eCLIP9.27□□□□□ -0.93
LSM2-213ENST00000491421 MAFO75444 373 aaPredicted RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 STBD1O95210 358 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 SEC24BO95487 1268 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 FGFR1P11362 822 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 QARSP47897 775 aaKnown RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 FOSBP53539 338 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 FAM189BP81408 668 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 CDC42EP1Q00587 391 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 NR5A1Q13285 461 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 DRP2Q13474 957 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 TRIM29Q14134 588 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 COL19A1Q14993 1142 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 PUS10Q3MIT2 529 aaKnown RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 EARS2Q5JPH6 523 aaKnown RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 FAM102BQ5T8I3 360 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 PLA2G4FQ68DD2 849 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 PTCRAQ6ISU1 281 aaPredicted RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 ANO5Q75V66 913 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 RNF169Q8NCN4 708 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 NSUN7Q8NE18 718 aaKnown RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 NEK9Q8TD19 979 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 HAS1Q92839 578 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 CEP89Q96ST8 783 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 JPH2Q9BR39 696 aaPredicted RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 GCOM2Q9BZD3 368 aaPredicted RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 ELAC1Q9H777 363 aaKnown RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 CLDND1Q9NY35 253 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 SUCLA2Q9P2R7 463 aaPredicted RBP9.27□□□□□ -0.93
LSM2-213ENST00000491421 PCDHB12Q9Y5F1 795 aa9.27□□□□□ -0.93
LSM2-213ENST00000491421 TTC3P53804 2025 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 IGKV6-21A0A0C4DH24 114 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 CSDE1O75534 798 aaKnown RBP9.26□□□□□ -0.93
LSM2-213ENST00000491421 BAG4O95429 457 aaKnown RBP9.26□□□□□ -0.93
LSM2-213ENST00000491421 P4HBP07237 508 aaKnown RBP9.26□□□□□ -0.93
LSM2-213ENST00000491421 FGFR4P22455 802 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 SFPQP23246 707 aaKnown RBP eCLIP9.26□□□□□ -0.93
LSM2-213ENST00000491421 DNAJB1P25685 340 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 HYAL1Q12794 435 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 CAMK1Q14012 370 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 NCAPH2Q6IBW4 605 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 DIS3L2Q8IYB7 885 aaKnown RBP9.26□□□□□ -0.93
LSM2-213ENST00000491421 SLFN12Q8IYM2 578 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 THNSL1Q8IYQ7 743 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 ABI1Q8IZP0 508 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 SPPL3Q8TCT6 385 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 POF1BQ8WVV4 589 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 SLC7A3Q8WY07 619 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 TNFRSF25Q93038 417 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 PPP2R3CQ969Q6 453 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 LXNQ9BS40 222 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 TMEM117Q9H0C3 514 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 IGFLR1Q9H665 355 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 CYP26B1Q9NR63 512 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 TYW1Q9NV66 732 aaKnown RBP9.26□□□□□ -0.93
LSM2-213ENST00000491421 HCSTQ9UBK5 93 aa9.26□□□□□ -0.93
LSM2-213ENST00000491421 A0A087WZ62 844 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 GRXCR2A6NFK2 248 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 BTBD18B2RXH4 712 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 FGF18O76093 207 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 IL9P15248 144 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 LAG3P18627 525 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 GTF2F1P35269 517 aaKnown RBP eCLIP9.25□□□□□ -0.93
LSM2-213ENST00000491421 IRS1P35568 1242 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 RFC5P40937 340 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 POLGP54098 1239 aaPredicted RBP9.25□□□□□ -0.93
LSM2-213ENST00000491421 NPEPPSP55786 919 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 SPIRE1Q08AE8 756 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 EPHA7Q15375 998 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 CALCRLQ16602 461 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 CSPP1Q1MSJ5 1256 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 CTC1Q2NKJ3 1217 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 ZNF410Q86VK4 478 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 ECHDC2Q86YB7 292 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 RHPN2Q8IUC4 686 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 FAM178BQ8IXR5 827 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 C4orf19Q8IY42 314 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 EXOC8Q8IYI6 725 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 LRRC43Q8N309 656 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 COLGALT1Q8NBJ5 622 aa9.25□□□□□ -0.93
LSM2-213ENST00000491421 MICAL1Q8TDZ2 1067 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms