RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 VWA3BQ502W6 1294 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 DCAF17Q5H9S7 520 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-219ENST00000491128 FAM114A1Q8IWE2 563 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 PPP1R16BQ96T49 567 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 FAM207AQ9NSI2 230 aaPredicted RBP15.31■□□□□ 0.04
SMPD4-219ENST00000491128 TYW1Q9NV66 732 aaKnown RBP15.31■□□□□ 0.04
SMPD4-219ENST00000491128 TRAF3IP3Q9Y228 551 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 CETN3O15182 167 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 KIF20AO95235 890 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 GSDMDP57764 484 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 ACVR2BQ13705 512 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 MTF1Q14872 753 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 TCERG1LQ5VWI1 586 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 PPFIBP1Q86W92 1011 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 DRC1Q96MC2 740 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 CBWD1Q9BRT8 395 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 ATP6V0A4Q9HBG4 840 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 ZFYVE28Q9HCC9 887 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 AGPAT3Q9NRZ7 376 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 TRPC6Q9Y210 931 aa15.31■□□□□ 0.04
SMPD4-219ENST00000491128 DENND3A2RUS2 1198 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 GOLGA8IPA6NC78 632 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 GOLGA8JA6NMD2 632 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 PDXKO00764 312 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 DGAT1O75907 488 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 TBC1D8O95759 1140 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 DMP1Q13316 513 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-219ENST00000491128 BMT2Q1RMZ1 405 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 ABRAQ8N0Z2 381 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 ASAP3Q8TDY4 903 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 CCDC102AQ96A19 550 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 GBP3Q9H0R5 595 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 KMT5AQ9NQR1 393 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 PDLIM7Q9NR12 457 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 AGPAT5Q9NUQ2 364 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 SEL1LQ9UBV2 794 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 TRPM7Q96QT4 1865 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 TTC26A0AVF1 554 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 TNPO2O14787 897 aaKnown RBP15.3■□□□□ 0.04
SMPD4-219ENST00000491128 CALUO43852 315 aaPredicted RBP15.3■□□□□ 0.04
SMPD4-219ENST00000491128 PPP1R37O75864 691 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 MORN1Q5T089 497 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 TMEM161BQ8NDZ6 487 aa15.3■□□□□ 0.04
SMPD4-219ENST00000491128 AKR1B15C9JRZ8 316 aaPredicted RBP15.29■□□□□ 0.04
SMPD4-219ENST00000491128 ANKRD63C9JTQ0 380 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 TOMM70O94826 608 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 MAP2K5Q13163 448 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 NOLC1Q14978 699 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPD4-219ENST00000491128 PLCB4Q15147 1175 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 FAM160B1Q5W0V3 765 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 CEP89Q96ST8 783 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 STRA6Q9BX79 667 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 SLC15A5A6NIM6 579 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 EIF3DO15371 548 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPD4-219ENST00000491128 DKC1O60832 514 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPD4-219ENST00000491128 MAN2A1Q16706 1144 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 CCDC150Q8NCX0 1101 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 SLC7A3Q8WY07 619 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 FAM84AQ96KN4 292 aa15.29■□□□□ 0.04
SMPD4-219ENST00000491128 DIS3Q9Y2L1 958 aaKnown RBP15.29■□□□□ 0.04
SMPD4-219ENST00000491128 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMPD4-219ENST00000491128 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 SOWAHDA6NJG2 315 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 ZBTB42B2RXF5 422 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
SMPD4-219ENST00000491128 FGFR1OPO95684 399 aaKnown RBP15.28■□□□□ 0.04
SMPD4-219ENST00000491128 TPM2P07951 284 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 TRIM21P19474 475 aaKnown RBP15.28■□□□□ 0.04
SMPD4-219ENST00000491128 DNM2P50570 870 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 SREBF2Q12772 1141 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 KCNV1Q6PIU1 500 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 TMEM139Q8IV31 216 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 SAAL1Q96ER3 474 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 VTA1Q9NP79 307 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.28■□□□□ 0.041e-12■■■■■ 111.8
SMPD4-219ENST00000491128 NRBP2Q9NSY0 501 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 PLXNB2O15031 1838 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 LRRC37A2A6NM11 1700 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 TRIM49P0CI25 452 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 TRIM49CP0CI26 452 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 SRGAP2CP0DJJ0 459 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 GLRA2P23416 452 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 HS2ST1Q7LGA3 356 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 METTL13Q8N6R0 699 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 CEP63Q96MT8 703 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 DESI2Q9BSY9 194 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
SMPD4-219ENST00000491128 TBX20Q9UMR3 447 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 GABRQQ9UN88 632 aa15.28■□□□□ 0.04
SMPD4-219ENST00000491128 MFAP3LO75121 409 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 CSDE1O75534 798 aaKnown RBP15.27■□□□□ 0.04
SMPD4-219ENST00000491128 GH1P01241 217 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 LGALS2P05162 132 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 KRT9P35527 623 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 SMTNP53814 917 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 NCKAP1LP55160 1127 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 KCNH2Q12809 1159 aa15.27■□□□□ 0.04
SMPD4-219ENST00000491128 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.04
SMPD4-219ENST00000491128 FKBP15Q5T1M5 1219 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms