RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 TSHZ2Q9NRE2 1034 aa23.41■■□□□ 1.34
CLIP2-208ENST00000491075 PSAPP07602 524 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 PBX3P40426 434 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 CLCN3P51790 818 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 NLRP11P59045 1033 aaKnown RBP23.4■■□□□ 1.34
CLIP2-208ENST00000491075 ITIH3Q06033 890 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 JAKMIP3Q5VZ66 844 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 MCTP2Q6DN12 878 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 ECHDC2Q86YB7 292 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 SORCS3Q9UPU3 1222 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 AKT3Q9Y243 479 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 PCDHA10Q9Y5I2 948 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 HCFC2Q9Y5Z7 792 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 MYO10Q9HD67 2058 aa23.4■■□□□ 1.34
CLIP2-208ENST00000491075 EIF4BP23588 611 aaKnown RBP23.39■■□□□ 1.33
CLIP2-208ENST00000491075 TMOD1P28289 359 aa23.39■■□□□ 1.33
CLIP2-208ENST00000491075 TRMT1LQ7Z2T5 733 aaKnown RBP23.39■■□□□ 1.33
CLIP2-208ENST00000491075 YTHDC1Q96MU7 727 aaKnown RBP23.39■■□□□ 1.33
CLIP2-208ENST00000491075 ADAM7Q9H2U9 754 aa23.39■■□□□ 1.33
CLIP2-208ENST00000491075 ADAMTS10Q9H324 1103 aa23.39■■□□□ 1.33
CLIP2-208ENST00000491075 BRPF3Q9ULD4 1205 aa23.39■■□□□ 1.33
CLIP2-208ENST00000491075 GOLGA8AA7E2F4 631 aa23.38■■□□□ 1.33
CLIP2-208ENST00000491075 GOLGA8BA8MQT2 603 aa23.38■■□□□ 1.33
CLIP2-208ENST00000491075 PDGFBP01127 241 aaPredicted RBP23.38■■□□□ 1.33
CLIP2-208ENST00000491075 CLLU1OSQ5K130 101 aa23.38■■□□□ 1.33
CLIP2-208ENST00000491075 EFCAB12Q6NXP0 572 aa23.38■■□□□ 1.33
CLIP2-208ENST00000491075 SLC39A11Q8N1S5 342 aa23.38■■□□□ 1.33
CLIP2-208ENST00000491075 LINC01465Q8N7H1 131 aa23.38■■□□□ 1.33
CLIP2-208ENST00000491075 MRPL43Q8N983 215 aaKnown RBP23.38■■□□□ 1.33
CLIP2-208ENST00000491075 POMKQ9H5K3 350 aa23.38■■□□□ 1.33
CLIP2-208ENST00000491075 GABBR1Q9UBS5 961 aa23.38■■□□□ 1.33
CLIP2-208ENST00000491075 ESYT2A0FGR8 921 aa23.37■■□□□ 1.33
CLIP2-208ENST00000491075 C2orf71A6NGG8 1288 aa23.37■■□□□ 1.33
CLIP2-208ENST00000491075 GALR2O43603 387 aaPredicted RBP23.37■■□□□ 1.33
CLIP2-208ENST00000491075 MTHFRP42898 656 aa23.37■■□□□ 1.33
CLIP2-208ENST00000491075 RCAN1P53805 252 aa23.37■■□□□ 1.33
CLIP2-208ENST00000491075 BMS1Q14692 1282 aaKnown RBP23.37■■□□□ 1.33
CLIP2-208ENST00000491075 PFKFB3Q16875 520 aaPredicted RBP23.37■■□□□ 1.33
CLIP2-208ENST00000491075 RNF169Q8NCN4 708 aa23.37■■□□□ 1.33
CLIP2-208ENST00000491075 MRPL9Q9BYD2 267 aaKnown RBP23.37■■□□□ 1.33
CLIP2-208ENST00000491075 SAMM50Q9Y512 469 aa23.37■■□□□ 1.33
CLIP2-208ENST00000491075 MYO15AQ9UKN7 3530 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 A0A0U1RQF3 1178 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 C2CD4DB7Z1M9 353 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 PROB1E7EW31 1015 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 H0Y858 1186 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 EOMESO95936 686 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 EXOSC10Q01780 885 aaKnown RBP23.36■■□□□ 1.33
CLIP2-208ENST00000491075 DHX32Q7L7V1 743 aaKnown RBP23.36■■□□□ 1.33
CLIP2-208ENST00000491075 REXO1Q8N1G1 1221 aaKnown RBP23.36■■□□□ 1.33
CLIP2-208ENST00000491075 LRRC71Q8N4P6 559 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 CCDC12Q8WUD4 166 aaPredicted RBP23.36■■□□□ 1.33
CLIP2-208ENST00000491075 TCEANC2Q96MN5 208 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 CDH22Q9UJ99 828 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 DENND4AQ7Z401 1863 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 VPS13AQ96RL7 3174 aa23.36■■□□□ 1.33
CLIP2-208ENST00000491075 KLF18A0A0U1RQI7 1052 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 WDR64B1ANS9 1081 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 CLASP2O75122 1294 aaKnown RBP23.35■■□□□ 1.33
CLIP2-208ENST00000491075 BRD1O95696 1058 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 CDC27P30260 824 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 GPC3P51654 580 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 ZNF598Q86UK7 904 aaKnown RBP23.35■■□□□ 1.33
CLIP2-208ENST00000491075 RSPH1Q8WYR4 309 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 SCLT1Q96NL6 688 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 ZMYND12Q9H0C1 365 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 C6orf50Q9HD87 102 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 FAM217BQ9NTX9 383 aaPredicted RBP23.35■■□□□ 1.33
CLIP2-208ENST00000491075 DACT1Q9NYF0 836 aa23.35■■□□□ 1.33
CLIP2-208ENST00000491075 OATP04181 439 aa23.34■■□□□ 1.33
CLIP2-208ENST00000491075 DARSP14868 501 aaKnown RBP23.34■■□□□ 1.33
CLIP2-208ENST00000491075 ALDH7A1P49419 539 aaKnown RBP23.34■■□□□ 1.33
CLIP2-208ENST00000491075 PRR16Q569H4 304 aa23.34■■□□□ 1.33
CLIP2-208ENST00000491075 HELQQ8TDG4 1101 aa23.34■■□□□ 1.33
CLIP2-208ENST00000491075 TMEM169Q96HH4 297 aa23.34■■□□□ 1.33
CLIP2-208ENST00000491075 NRBP2Q9NSY0 501 aa23.34■■□□□ 1.33
CLIP2-208ENST00000491075 DZANK1Q9NVP4 752 aa23.34■■□□□ 1.33
CLIP2-208ENST00000491075 CARNS1A5YM72 827 aa23.33■■□□□ 1.33
CLIP2-208ENST00000491075 CA8P35219 290 aa23.33■■□□□ 1.33
CLIP2-208ENST00000491075 METAP2P50579 478 aaKnown RBP eCLIP23.33■■□□□ 1.33
CLIP2-208ENST00000491075 BCAR1P56945 870 aa23.33■■□□□ 1.33
CLIP2-208ENST00000491075 PRKCEQ02156 737 aa23.33■■□□□ 1.33
CLIP2-208ENST00000491075 TDRD5Q8NAT2 981 aaKnown RBP23.33■■□□□ 1.33
CLIP2-208ENST00000491075 CCDC196A0A1B0GTZ2 297 aa23.32■■□□□ 1.32
CLIP2-208ENST00000491075 ZNF862O60290 1169 aa23.32■■□□□ 1.32
CLIP2-208ENST00000491075 CIITAP33076 1130 aa23.32■■□□□ 1.32
CLIP2-208ENST00000491075 RARS2Q5T160 578 aaKnown RBP23.32■■□□□ 1.32
CLIP2-208ENST00000491075 KIAA1841Q6NSI8 718 aa23.32■■□□□ 1.32
CLIP2-208ENST00000491075 ZDHHC14Q8IZN3 488 aa23.32■■□□□ 1.32
CLIP2-208ENST00000491075 TMEM105Q8N8V8 129 aa23.32■■□□□ 1.32
CLIP2-208ENST00000491075 ZNF668Q96K58 619 aaPredicted RBP23.32■■□□□ 1.32
CLIP2-208ENST00000491075 DISC1Q9NRI5 854 aa23.32■■□□□ 1.32
CLIP2-208ENST00000491075 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.31■■□□□ 1.32
CLIP2-208ENST00000491075 CXCL14O95715 111 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 GNA11P29992 359 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 TBC1D8BQ0IIM8 1120 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 GIT2Q14161 759 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 TSGA10IPQ3SY00 556 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 VPS52Q8N1B4 723 aa23.31■■□□□ 1.32
CLIP2-208ENST00000491075 PLCD3Q8N3E9 789 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms