RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TRAF3IP3Q9Y228 551 aa7.96□□□□□ -1.14
NPHP3-208ENST00000490993 DENND3A2RUS2 1198 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 WNT7AO00755 349 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 SEC31AO94979 1220 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 FTCDO95954 541 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 UCHL3P15374 230 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 GUCY2CP25092 1073 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 FMO5P49326 533 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 PMS1P54277 932 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 OAZ1P54368 228 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 C2orf54Q08AI8 447 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 BAATQ14032 418 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 XKR3Q5GH77 459 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 KRT39Q6A163 491 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 SWSAP1Q6NVH7 229 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 EMBQ6PCB8 327 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 DBR1Q9UK59 544 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 GOLGA6L7A0A1B0GV03 622 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 GAS8O95995 478 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 TMEM191BP0C7N4 346 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 AP3M2P53677 418 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 DRAP1Q14919 205 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 EAPPQ56P03 285 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 DCUN1D2Q6PH85 259 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 AMIGO3Q86WK7 504 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 HAS1Q92839 578 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 KRT12Q99456 494 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 SUGCTQ9HAC7 445 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ANKFY1Q9P2R3 1169 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 SNX12Q9UMY4 172 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 TUBGCP6Q96RT7 1819 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 M0R2N6 131 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 MEIS2O14770 477 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 NEFHP12036 1026 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 POLR2BP30876 1174 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 BACE1P56817 501 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ANGEL2Q5VTE6 544 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ZNF365Q70YC5 407 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 CCDC105Q8IYK2 499 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 WHAMMQ8TF30 809 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 SCFD1Q8WVM8 642 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ZFP91Q96JP5 570 aaPredicted RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 CCDC114Q96M63 670 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 RUSC1Q9BVN2 902 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 NSRP1Q9H0G5 558 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 INTUQ9ULD6 942 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 SNED1Q8TER0 1413 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 GTPBP10A4D1E9 387 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 LRRN2O75325 713 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ATP1A1P05023 1023 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 GJC1P36383 396 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 BFSP1Q12934 665 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 KLHDC7AQ5VTJ3 777 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ALS2CLQ60I27 953 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 FASTKD5Q7L8L6 764 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 GPD1LQ8N335 351 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 METTL13Q8N6R0 699 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ZNF507Q8TCN5 953 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ANKRD36BP1Q96IX9 119 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ADPGKQ9BRR6 497 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 MRPL47Q9HD33 250 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 ABCB6Q9NP58 842 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 INTS13Q9NVM9 706 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 APEX2Q9UBZ4 518 aa7.95□□□□□ -1.14
NPHP3-208ENST00000490993 DDX60Q8IY21 1712 aaKnown RBP7.95□□□□□ -1.14
NPHP3-208ENST00000490993 GLI3P10071 1580 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 FAM86B1E9PN63 330 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 WNT10BO00744 389 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 FAM86B2P0C5J1 330 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 SLC12A3P55017 1021 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 GUCY2DQ02846 1103 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 CUL1Q13616 776 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 MTMR14Q8NCE2 650 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 GTF3C2Q8WUA4 911 aaPredicted RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 ZNF653Q96CK0 615 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 MSTO1Q9BUK6 570 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 C2orf40Q9H1Z8 148 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 STIM2Q9P246 746 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 CD2APQ9Y5K6 639 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 SORBS3O60504 671 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 HEXIM1O94992 359 aaKnown RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 RPS6P62753 249 aaKnown RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 MAPK8IP2Q13387 824 aaPredicted RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 NAB2Q15742 525 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 MEA1Q16626 185 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 OTOP1Q7RTM1 612 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 BBOF1Q8ND07 529 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 PDE11AQ9HCR9 933 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 HSPBP1Q9NZL4 362 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 PCDHB4Q9Y5E5 795 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 PRLRP16471 622 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 PBX1P40424 430 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 CLK2P49760 499 aaKnown RBP7.94□□□□□ -1.14
NPHP3-208ENST00000490993 KLK7P49862 253 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 GPC5P78333 572 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 PLCB3Q01970 1234 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 NBPF9Q3BBW0 867 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 TRIM59Q8IWR1 403 aa7.94□□□□□ -1.14
NPHP3-208ENST00000490993 MTMR8Q96EF0 704 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms