RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 NLRP7Q8WX94 980 aa35.17■■■■□ 3.22
LDB1-204ENST00000490751 ZSCAN31Q96LW9 406 aaPredicted RBP35.17■■■■□ 3.22
LDB1-204ENST00000490751 RNF216Q9NWF9 866 aaPredicted RBP35.17■■■■□ 3.22
LDB1-204ENST00000490751 TCF20Q9UGU0 1960 aaKnown RBP35.16■■■■□ 3.22
LDB1-204ENST00000490751 WNT7AO00755 349 aa35.16■■■■□ 3.22
LDB1-204ENST00000490751 MAFO75444 373 aaPredicted RBP35.16■■■■□ 3.22
LDB1-204ENST00000490751 DARSP14868 501 aaKnown RBP35.16■■■■□ 3.22
LDB1-204ENST00000490751 DNM2P50570 870 aa35.16■■■■□ 3.22
LDB1-204ENST00000490751 KCNQ1P51787 676 aa35.16■■■■□ 3.22
LDB1-204ENST00000490751 ADAMTS19Q8TE59 1207 aa35.16■■■■□ 3.22
LDB1-204ENST00000490751 LXNQ9BS40 222 aa35.16■■■■□ 3.22
LDB1-204ENST00000490751 CYP26B1Q9NR63 512 aa35.16■■■■□ 3.22
LDB1-204ENST00000490751 RBM25P49756 843 aaKnown RBP35.15■■■■□ 3.22
LDB1-204ENST00000490751 SAFBQ15424 915 aaKnown RBP eCLIP35.15■■■■□ 3.22
LDB1-204ENST00000490751 CALCRLQ16602 461 aa35.15■■■■□ 3.22
LDB1-204ENST00000490751 C8orf76Q96K31 380 aa35.15■■■■□ 3.22
LDB1-204ENST00000490751 SH2B1Q9NRF2 756 aaPredicted RBP35.15■■■■□ 3.22
LDB1-204ENST00000490751 RGL1Q9NZL6 768 aa35.15■■■■□ 3.22
LDB1-204ENST00000490751 NPEPPSP55786 919 aa35.14■■■■□ 3.22
LDB1-204ENST00000490751 DYDC2Q96IM9 177 aa35.14■■■■□ 3.22
LDB1-204ENST00000490751 JPH2Q9BR39 696 aaPredicted RBP35.14■■■■□ 3.22
LDB1-204ENST00000490751 PLVAPQ9BX97 442 aa35.14■■■■□ 3.22
LDB1-204ENST00000490751 SUCLA2Q9P2R7 463 aaPredicted RBP35.14■■■■□ 3.22
LDB1-204ENST00000490751 ARID2Q68CP9 1835 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 TTC28Q96AY4 2481 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 GRM6O15303 877 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 NEMFO60524 1076 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 BMP1P13497 986 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 FGFR4P22455 802 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 CDC42EP1Q00587 391 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 C4orf19Q8IY42 314 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 CEP170P1Q96L14 293 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 LMAN2LQ9H0V9 348 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 TMEM161AQ9NX61 479 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 PCDHA12Q9UN75 941 aa35.13■■■■□ 3.21
LDB1-204ENST00000490751 BRWD1Q9NSI6 2320 aa35.12■■■■□ 3.21
LDB1-204ENST00000490751 ZSCAN20P17040 1043 aaPredicted RBP35.12■■■■□ 3.21
LDB1-204ENST00000490751 FAM189BP81408 668 aa35.12■■■■□ 3.21
LDB1-204ENST00000490751 CYP4A11Q02928 519 aa35.12■■■■□ 3.21
LDB1-204ENST00000490751 FAM102BQ5T8I3 360 aa35.12■■■■□ 3.21
LDB1-204ENST00000490751 ZNF579Q8NAF0 562 aaKnown RBP35.12■■■■□ 3.21
LDB1-204ENST00000490751 GCOM2Q9BZD3 368 aaPredicted RBP35.12■■■■□ 3.21
LDB1-204ENST00000490751 ELAC1Q9H777 363 aaKnown RBP35.12■■■■□ 3.21
LDB1-204ENST00000490751 UBE2ZQ9H832 354 aaPredicted RBP35.12■■■■□ 3.21
LDB1-204ENST00000490751 ATP6V0A4Q9HBG4 840 aa35.12■■■■□ 3.21
LDB1-204ENST00000490751 TBKBP1A7MCY6 615 aa35.11■■■■□ 3.21
LDB1-204ENST00000490751 CSDE1O75534 798 aaKnown RBP35.11■■■■□ 3.21
LDB1-204ENST00000490751 YWHABP31946 246 aaKnown RBP35.11■■■■□ 3.21
LDB1-204ENST00000490751 HMGN5P82970 282 aaKnown RBP35.11■■■■□ 3.21
LDB1-204ENST00000490751 CTTNQ14247 550 aaKnown RBP35.11■■■■□ 3.21
LDB1-204ENST00000490751 RHPN2Q8IUC4 686 aa35.11■■■■□ 3.21
LDB1-204ENST00000490751 P2RX5Q93086 422 aa35.11■■■■□ 3.21
LDB1-204ENST00000490751 UHRF1Q96T88 793 aaPredicted RBP35.11■■■■□ 3.21
LDB1-204ENST00000490751 NSUN3Q9H649 340 aaKnown RBP35.11■■■■□ 3.21
LDB1-204ENST00000490751 ZSWIM4Q9H7M6 989 aa35.11■■■■□ 3.21
LDB1-204ENST00000490751 A0A087WZ62 844 aa35.1■■■■□ 3.21
LDB1-204ENST00000490751 ATP2B1P20020 1258 aa35.1■■■■□ 3.21
LDB1-204ENST00000490751 TCEAL5Q5H9L2 206 aa35.1■■■■□ 3.21
LDB1-204ENST00000490751 SLC7A3Q8WY07 619 aa35.1■■■■□ 3.21
LDB1-204ENST00000490751 FDXACB1Q9BRP7 624 aaPredicted RBP35.1■■■■□ 3.21
LDB1-204ENST00000490751 TTC12Q9H892 705 aaPredicted RBP35.1■■■■□ 3.21
LDB1-204ENST00000490751 ALG13Q9NP73 1137 aaKnown RBP35.1■■■■□ 3.21
LDB1-204ENST00000490751 PPME1Q9Y570 386 aa35.1■■■■□ 3.21
LDB1-204ENST00000490751 FGFR1P11362 822 aa35.09■■■■□ 3.21
LDB1-204ENST00000490751 TXKP42681 527 aa35.09■■■■□ 3.21
LDB1-204ENST00000490751 POLGP54098 1239 aaPredicted RBP35.09■■■■□ 3.21
LDB1-204ENST00000490751 ZNF410Q86VK4 478 aa35.09■■■■□ 3.21
LDB1-204ENST00000490751 PLAGL2Q9UPG8 496 aa35.09■■■■□ 3.21
LDB1-204ENST00000490751 RABEP1Q15276 862 aa35.08■■■■□ 3.21
LDB1-204ENST00000490751 OTUD6AQ7L8S5 288 aa35.08■■■■□ 3.21
LDB1-204ENST00000490751 KSR1Q8IVT5 923 aa35.08■■■■□ 3.21
LDB1-204ENST00000490751 TPH2Q8IWU9 490 aa35.08■■■■□ 3.21
LDB1-204ENST00000490751 FAM184AQ8NB25 1140 aa35.08■■■■□ 3.21
LDB1-204ENST00000490751 NLRP4Q96MN2 994 aa35.08■■■■□ 3.21
LDB1-204ENST00000490751 MTMR9Q96QG7 549 aa35.08■■■■□ 3.21
LDB1-204ENST00000490751 EIF2AK1Q9BQI3 630 aaKnown RBP35.08■■■■□ 3.21
LDB1-204ENST00000490751 DHX33Q9H6R0 707 aaKnown RBP35.08■■■■□ 3.21
LDB1-204ENST00000490751 BMP2KQ9NSY1 1161 aaPredicted RBP35.08■■■■□ 3.21
LDB1-204ENST00000490751 MYO7AQ13402 2215 aa35.08■■■■□ 3.21
LDB1-204ENST00000490751 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP35.07■■■■□ 3.2
LDB1-204ENST00000490751 SLITRK3O94933 977 aa35.07■■■■□ 3.2
LDB1-204ENST00000490751 CSPG5O95196 566 aa35.07■■■■□ 3.2
LDB1-204ENST00000490751 RFC5P40937 340 aa35.07■■■■□ 3.2
LDB1-204ENST00000490751 NAALADL2Q58DX5 795 aa35.07■■■■□ 3.2
LDB1-204ENST00000490751 SPOUT1Q5T280 376 aaKnown RBP35.07■■■■□ 3.2
LDB1-204ENST00000490751 EXOC8Q8IYI6 725 aa35.07■■■■□ 3.2
LDB1-204ENST00000490751 FBXO18Q8NFZ0 1043 aa35.07■■■■□ 3.2
LDB1-204ENST00000490751 TMEM60Q9H2L4 133 aa35.07■■■■□ 3.2
LDB1-204ENST00000490751 TNFRSF10AO00220 468 aa35.06■■■■□ 3.2
LDB1-204ENST00000490751 ZBTB39O15060 712 aa35.06■■■■□ 3.2
LDB1-204ENST00000490751 ITGB1P05556 798 aa35.06■■■■□ 3.2
LDB1-204ENST00000490751 MCM7P33993 719 aa35.06■■■■□ 3.2
LDB1-204ENST00000490751 XKR9Q5GH70 373 aa35.06■■■■□ 3.2
LDB1-204ENST00000490751 ECHDC2Q86YB7 292 aa35.06■■■■□ 3.2
LDB1-204ENST00000490751 KLHL23Q8NBE8 558 aa35.06■■■■□ 3.2
LDB1-204ENST00000490751 NECAB3Q96P71 396 aaPredicted RBP35.06■■■■□ 3.2
LDB1-204ENST00000490751 INO80BQ9C086 356 aaPredicted RBP35.06■■■■□ 3.2
LDB1-204ENST00000490751 FOXP1Q9H334 677 aaPredicted RBP35.06■■■■□ 3.2
LDB1-204ENST00000490751 COL4A3BPQ9Y5P4 624 aa35.06■■■■□ 3.2
LDB1-204ENST00000490751 PLXNA4Q9HCM2 1894 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms