RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 VTI1AQ96AJ9 217 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 ZSWIM4Q9H7M6 989 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 DMDP11532 3685 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 ATP2A2P16615 1042 aaKnown RBP10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 SP4Q02446 784 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 NAB2Q15742 525 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 NAALADL2Q58DX5 795 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 ARSHQ5FYA8 562 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 FAM47CQ5HY64 1035 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 C1orf186Q6ZWK4 172 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 BRAPQ7Z569 592 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 DEFB128Q7Z7B8 93 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 BSNDQ8WZ55 320 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 IFIH1Q9BYX4 1025 aaKnown RBP10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 ADGRA3Q8IWK6 1321 aa10.3□□□□□ -0.76
SUPT20H-220ENST00000490716 TRIOO75962 3097 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 SARSP49591 514 aaKnown RBP10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 NPEPPSP55786 919 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 MBTD1Q05BQ5 628 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 FERMT3Q86UX7 667 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 RETREG2Q8NC44 543 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 CASD1Q96PB1 797 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 NTPCRQ9BSD7 190 aaKnown RBP10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 BLOC1S4Q9NUP1 217 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 FSCN2O14926 492 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 CD52P31358 61 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 CLCN3P51790 818 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 MCCD1P59942 119 aaPredicted RBP10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 RAB30Q15771 203 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 CNNM4Q6P4Q7 775 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 TIFAQ96CG3 184 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 RAD9AQ99638 391 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 FTHL17Q9BXU8 183 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 ZNF576Q9H609 170 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 PTPRHQ9HD43 1115 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 LMCD1Q9NZU5 365 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 A0A0C4DFX4 3053 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 FAM189A1O60320 539 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 ZNF623O75123 536 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 VTNP04004 478 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 PROZP22891 400 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 ZNF131P52739 623 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 IKBKEQ14164 716 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 CTTNQ14247 550 aaKnown RBP10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 IER5Q5VY09 327 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 ASAP3Q8TDY4 903 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 SLC4A7Q9Y6M7 1214 aa10.29□□□□□ -0.76
SUPT20H-220ENST00000490716 GLRA2P23416 452 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 ZNF174Q15697 407 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 GSTCDQ8NEC7 633 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 NKX2-4Q9H2Z4 354 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 FZD8Q9H461 694 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 AGPAT5Q9NUQ2 364 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 NOTCH4Q99466 2003 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 FAM237AA0A1B0GTK4 181 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 ADRB2P07550 413 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 MCM7P33993 719 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 PTENP60484 403 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 PKP1Q13835 747 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 CAPSQ13938 189 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 PCBP1Q15365 356 aaKnown RBP eCLIP10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 DEFB123Q8N688 67 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 TNPO1Q92973 898 aaKnown RBP10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 BRMS1Q9HCU9 246 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 NRBP2Q9NSY0 501 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 ST3GAL5Q9UNP4 418 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 MTCH2Q9Y6C9 303 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 OBSL1O75147 1896 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 A0A087X0B3 334 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 FRMD3A2A2Y4 597 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 EIF4BP23588 611 aaKnown RBP10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 E2F4Q16254 413 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 LRRC71Q8N4P6 559 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 CHST12Q9NRB3 414 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 TRPC6Q9Y210 931 aa10.28□□□□□ -0.76
SUPT20H-220ENST00000490716 TTLL13PA6NNM8 815 aa10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 PP2D1A8MPX8 630 aa10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 GHRP10912 638 aa10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 XKR4Q5GH76 650 aa10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 CLLU1OSQ5K130 101 aa10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 NPAS4Q8IUM7 802 aa10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 CMTR2Q8IYT2 770 aaKnown RBP10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 CLIC4Q9Y696 253 aa10.27□□□□□ -0.76
SUPT20H-220ENST00000490716 PTPRDP23468 1912 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 CHMP2AO43633 222 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 B4GALT3O60512 393 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 BRD1O95696 1058 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 CA3P07451 260 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 TECP42680 631 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 CDC42EP1Q00587 391 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 LAMTOR4Q0VGL1 99 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 EMC2Q15006 297 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 AXDND1Q5T1B0 1012 aaPredicted RBP10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 SMG8Q8ND04 991 aaKnown RBP10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 SEPT8Q92599 483 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 CCSER1Q9C0I3 900 aa10.27□□□□□ -0.77
SUPT20H-220ENST00000490716 A0A0U1RQF3 1178 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms