RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 FRYQ5TBA9 3013 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 CTSAP10619 480 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 ITGB5P18084 799 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 MX1P20591 662 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 ALDH7A1P49419 539 aaKnown RBP15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 DMWDQ09019 674 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 TRAF1Q13077 416 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 ST13P5Q8NFI4 369 aaPredicted RBP15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 SMARCC2Q8TAQ2 1214 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 HELQQ8TDG4 1101 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 COL26A1Q96A83 441 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 MYADMQ96S97 322 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 EPC1Q9H2F5 836 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 RIOX1Q9H6W3 641 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 PCDHGA2Q9Y5H1 932 aa15.7■□□□□ 0.1
EXOSC3-207ENST00000490516 PNMA6FA0A0J9YX94 578 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 ZNF213O14771 459 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 LAMTOR5O43504 91 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 CYTH3O43739 400 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 NMIQ13287 307 aaPredicted RBP15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 WTAPQ15007 396 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 IFIT1BQ5T764 474 aaKnown RBP15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 C15orf39Q6ZRI6 1047 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 ECHDC2Q86YB7 292 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 BCL7CQ8WUZ0 217 aaPredicted RBP15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 PIBF1Q8WXW3 757 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 EVI5LQ96CN4 794 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 BORCS6Q96GS4 357 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 CDHR1Q96JP9 859 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 EPS15L1Q9UBC2 864 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 FBXO4Q9UKT5 387 aa15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.69■□□□□ 0.1
EXOSC3-207ENST00000490516 RALGAPA1Q6GYQ0 2036 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 ASPMQ8IZT6 3477 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 SLC30A4O14863 429 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 KCNA4P22459 653 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 STAT5BP51692 787 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 CLCN4P51793 760 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 MTMR1Q13613 665 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 GIT2Q14161 759 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 PPFIBP1Q86W92 1011 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 ZBTB44Q8NCP5 570 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 JPH1Q9HDC5 661 aaPredicted RBP15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 ANGPTL2Q9UKU9 493 aa15.68■□□□□ 0.1
EXOSC3-207ENST00000490516 MEIS2O14770 477 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 LILRB5O75023 590 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 ZC3H11AO75152 810 aaKnown RBP eCLIP15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 KLRC2P26717 231 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 CRYBB1P53674 252 aaPredicted RBP15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 POLGP54098 1239 aaPredicted RBP15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 STARD6P59095 220 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 SPEM2Q0P670 501 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 PLPPR4Q7Z2D5 763 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 DDX53Q86TM3 631 aaKnown RBP15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 KLHL5Q96PQ7 755 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 UBAC1Q9BSL1 405 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 VN1R3Q9BXE9 311 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 WDR6Q9NNW5 1121 aaKnown RBP15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 ZSCAN32Q9NX65 697 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 SLC9A2Q9UBY0 812 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 MTF2Q9Y483 593 aaPredicted RBP15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 CLUHO75153 1309 aa15.67■□□□□ 0.1
EXOSC3-207ENST00000490516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 GPR32O75388 356 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 VTNP04004 478 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 MYBP10242 640 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 ACTR2P61160 394 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 TSSK4Q6SA08 328 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 NETO1Q8TDF5 533 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 CUL5Q93034 780 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 NXPE3Q969Y0 559 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 IGSF21Q96ID5 467 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 BCO2Q9BYV7 579 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 SLC2A4RGQ9NR83 387 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 GMEB2Q9UKD1 530 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 UBIAD1Q9Y5Z9 338 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 ZFYVE26Q68DK2 2539 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 SALL3Q9BXA9 1300 aa15.66■□□□□ 0.1
EXOSC3-207ENST00000490516 CCDC195A0A1B0GUA6 201 aa15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 SSBP05455 408 aaKnown RBP eCLIP15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 CNPP09543 421 aaKnown RBP15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 ZSCAN20P17040 1043 aaPredicted RBP15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 NT5C2P49902 561 aa15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 GRM4Q14833 912 aa15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 SEC23AQ15436 765 aa15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 C20orf194Q5TEA3 1177 aa15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 ZNF598Q86UK7 904 aaKnown RBP15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 STAMQ92783 540 aa15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 MRPL9Q9BYD2 267 aaKnown RBP15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 MAN1C1Q9NR34 630 aa15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 DOCK6Q96HP0 2047 aa15.65■□□□□ 0.1
EXOSC3-207ENST00000490516 CNOT1A5YKK6 2376 aaKnown RBP15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 SPEGQ15772 3267 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 KANSL1LA0AUZ9 987 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 PIK3CDO00329 1044 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 TBC1D4O60343 1298 aa15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 SNW1Q13573 536 aaKnown RBP15.64■□□□□ 0.09
EXOSC3-207ENST00000490516 HTR4Q13639 388 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms