RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 VPS52Q8N1B4 723 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 TMEM87AQ8NBN3 555 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 HELQQ8TDG4 1101 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 SLC22A17Q8WUG5 538 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 RMDN1Q96DB5 314 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 DZANK1Q9NVP4 752 aa18.4■□□□□ 0.54
USP48-210ENST00000489108 ZNF292O60281 2723 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 MYH9P35579 1960 aaKnown RBP18.39■□□□□ 0.53
USP48-210ENST00000489108 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.39■□□□□ 0.53
USP48-210ENST00000489108 MED19A0JLT2 244 aaPredicted RBP18.39■□□□□ 0.53
USP48-210ENST00000489108 CCDC69A6NI79 296 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 PRC1O43663 620 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 ALDH7A1P49419 539 aaKnown RBP18.39■□□□□ 0.53
USP48-210ENST00000489108 TDGQ13569 410 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 MIS18BP1Q6P0N0 1132 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 TMTC2Q8N394 836 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 KCNG4Q8TDN1 519 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 RUFY2Q8WXA3 655 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 ZNF668Q96K58 619 aaPredicted RBP18.39■□□□□ 0.53
USP48-210ENST00000489108 RTP3Q9BQQ7 232 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 ANO3Q9BYT9 981 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 ADAMTS10Q9H324 1103 aa18.39■□□□□ 0.53
USP48-210ENST00000489108 DMXL1Q9Y485 3027 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 SH2B2O14492 632 aaPredicted RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 DHX15O43143 795 aaKnown RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 FOSP01100 380 aaPredicted RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 GSPT1P15170 499 aaKnown RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 EIF4BP23588 611 aaKnown RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 CHMLP26374 656 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 ZNF76P36508 570 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 CLCN3P51790 818 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 COL9A3Q14050 684 aaPredicted RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 WWC2Q6AWC2 1192 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 TYW1BQ6NUM6 668 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 ZNF598Q86UK7 904 aaKnown RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 SIX5Q8N196 739 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 ACSF2Q96CM8 615 aaPredicted RBP18.38■□□□□ 0.53
USP48-210ENST00000489108 TMEM169Q96HH4 297 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 ZBP1Q9H171 429 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 RIC8AQ9NPQ8 531 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 FBXL21Q9UKT6 434 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 AKT3Q9Y243 479 aa18.38■□□□□ 0.53
USP48-210ENST00000489108 A0A0U1RQF3 1178 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 CALM1P0DP23 149 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 CALM2P0DP24 149 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 CALM3P0DP25 149 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 EFCAB12Q6NXP0 572 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 TMTC3Q6ZXV5 915 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 CABP7Q86V35 215 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 TMEM173Q86WV6 379 aaPredicted RBP18.37■□□□□ 0.53
USP48-210ENST00000489108 FANCBQ8NB91 859 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 MTA3Q9BTC8 594 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 KCNK12Q9HB15 430 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 DUSP12Q9UNI6 340 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 MAFBQ9Y5Q3 323 aaPredicted RBP18.37■□□□□ 0.53
USP48-210ENST00000489108 IRAK3Q9Y616 596 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 DENND4AQ7Z401 1863 aa18.37■□□□□ 0.53
USP48-210ENST00000489108 LMNAP02545 664 aaKnown RBP18.36■□□□□ 0.53
USP48-210ENST00000489108 CTSAP10619 480 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 FGFR4P22455 802 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 NIPA1Q7RTP0 329 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 OTOP3Q7RTS5 596 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 DGLUCYQ7Z3D6 616 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 GPR149Q86SP6 731 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 PLA2G4DQ86XP0 818 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 KIAA2013Q8IYS2 634 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 LRRC71Q8N4P6 559 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 MAP4K1Q92918 833 aa18.36■□□□□ 0.53
USP48-210ENST00000489108 FAM86B1E9PN63 330 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 STK25O00506 426 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 MAGEB2O15479 319 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 FAM86B2P0C5J1 330 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 MCM5P33992 734 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 SREBF1P36956 1147 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 NAPAP54920 295 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 AAMPQ13685 434 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 GIT2Q14161 759 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 CCDC149Q6ZUS6 474 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 DDX53Q86TM3 631 aaKnown RBP18.35■□□□□ 0.53
USP48-210ENST00000489108 LINC01465Q8N7H1 131 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 TMEM87BQ96K49 555 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 MAP7D2Q96T17 732 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 MRPL9Q9BYD2 267 aaKnown RBP18.35■□□□□ 0.53
USP48-210ENST00000489108 SEMA4AQ9H3S1 761 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
USP48-210ENST00000489108 SLC12A7Q9Y666 1083 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 R4GN57 208 aa18.35■□□□□ 0.53
USP48-210ENST00000489108 IPO5O00410 1097 aaKnown RBP18.34■□□□□ 0.53
USP48-210ENST00000489108 SGSM2O43147 1006 aa18.34■□□□□ 0.53
USP48-210ENST00000489108 NARSO43776 548 aaKnown RBP18.34■□□□□ 0.53
USP48-210ENST00000489108 ZC3H11AO75152 810 aaKnown RBP eCLIP18.34■□□□□ 0.53
USP48-210ENST00000489108 LIFRP42702 1097 aa18.34■□□□□ 0.53
USP48-210ENST00000489108 ADCY7P51828 1080 aa18.34■□□□□ 0.53
USP48-210ENST00000489108 POLGP54098 1239 aaPredicted RBP18.34■□□□□ 0.53
USP48-210ENST00000489108 BCL7CQ8WUZ0 217 aaPredicted RBP18.34■□□□□ 0.53
USP48-210ENST00000489108 IGSF21Q96ID5 467 aa18.34■□□□□ 0.53
USP48-210ENST00000489108 CEP131Q9UPN4 1083 aa18.34■□□□□ 0.53
USP48-210ENST00000489108 C2orf16Q68DN1 1984 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms