RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 ADAMTS19Q8TE59 1207 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 NLRP7Q8WX94 980 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 HAS1Q92839 578 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 P2RX5Q93086 422 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 ADAMTS10Q9H324 1103 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 NSUN3Q9H649 340 aaKnown RBP15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 ELAC1Q9H777 363 aaKnown RBP15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 TMEM161AQ9NX61 479 aa15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 MRPL42Q9Y6G3 142 aaKnown RBP15.48■□□□□ 0.07
SPTLC1-207ENST00000488921 FAM205CA6NFA0 338 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 BTBD18B2RXH4 712 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 C9IYK1 514 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 EML1O00423 815 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 HOXA2O43364 376 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 NEMFO60524 1076 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 STBD1O95210 358 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 DARSP14868 501 aaKnown RBP15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 IBSPP21815 317 aaPredicted RBP15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 FOSBP53539 338 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 ST3GAL1Q11201 340 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 CALCRLQ16602 461 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 NCAPH2Q6IBW4 605 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 ANO5Q75V66 913 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 ZNF410Q86VK4 478 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 C4orf19Q8IY42 314 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 SLC7A3Q8WY07 619 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 CEP89Q96ST8 783 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 UHRF1Q96T88 793 aaPredicted RBP15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 LXNQ9BS40 222 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 GCOM2Q9BZD3 368 aaPredicted RBP15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 INO80BQ9C086 356 aaPredicted RBP15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 UBE2ZQ9H832 354 aaPredicted RBP15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 ATP6V0A4Q9HBG4 840 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 CYP26B1Q9NR63 512 aa15.47■□□□□ 0.07
SPTLC1-207ENST00000488921 TMEM150BA6NC51 233 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 TNFRSF10AO00220 468 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 GAS2O43903 313 aaKnown RBP15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 POLGP54098 1239 aaPredicted RBP15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 DSC3Q14574 896 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 PLA2G4FQ68DD2 849 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 OTUD6AQ7L8S5 288 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 NEK9Q8TD19 979 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 C8orf76Q96K31 380 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 ZSWIM4Q9H7M6 989 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 AAASQ9NRG9 546 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 DACT1Q9NYF0 836 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 PCDHA12Q9UN75 941 aa15.46■□□□□ 0.07
SPTLC1-207ENST00000488921 MUC3AQ02505 3323 aa15.46■□□□□ 0.06
SPTLC1-207ENST00000488921 NCK2O43639 380 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 BMP1P13497 986 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 YWHABP31946 246 aaKnown RBP15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 RFC5P40937 340 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 RBM25P49756 843 aaKnown RBP15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 KCNQ1P51787 676 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 FAM189BP81408 668 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 SPIRE1Q08AE8 756 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 DRP2Q13474 957 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 SPOUT1Q5T280 376 aaKnown RBP15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 RHPN2Q8IUC4 686 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 FAM184AQ8NB25 1140 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 PPP2R3CQ969Q6 453 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 CEP170P1Q96L14 293 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 SH2D3AQ9BRG2 576 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 UPF2Q9HAU5 1272 aaKnown RBP15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 SUCLA2Q9P2R7 463 aaPredicted RBP15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 PCDHB12Q9Y5F1 795 aa15.45■□□□□ 0.06
SPTLC1-207ENST00000488921 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 TBKBP1A7MCY6 615 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 GRM6O15303 877 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 GATMP50440 423 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 ORC2Q13416 577 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 GNL2Q13823 731 aaKnown RBP15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 RABEP1Q15276 862 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 TCEAL5Q5H9L2 206 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 ABI1Q8IZP0 508 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 TCP11Q8WWU5 503 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 DYDC2Q96IM9 177 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 ZNF668Q96K58 619 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 KIF2CQ99661 725 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 TMEM117Q9H0C3 514 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 FOXP1Q9H334 677 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 DHX33Q9H6R0 707 aaKnown RBP15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 TTC12Q9H892 705 aaPredicted RBP15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 CHST12Q9NRB3 414 aa15.44■□□□□ 0.06
SPTLC1-207ENST00000488921 BRWD1Q9NSI6 2320 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 A0A087WZ62 844 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 ST18O60284 1047 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 NPEPPSP55786 919 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 GUCY1B3Q02153 619 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 CYP4A11Q02928 519 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 FAM102BQ5T8I3 360 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 PSPC1Q8WXF1 523 aaKnown RBP15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 RSPH1Q8WYR4 309 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 PABPC5Q96DU9 382 aaKnown RBP15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 NLRP4Q96MN2 994 aa15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 CCDC43Q96MW1 224 aaKnown RBP15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 EIF2AK1Q9BQI3 630 aaKnown RBP15.43■□□□□ 0.06
SPTLC1-207ENST00000488921 FDXACB1Q9BRP7 624 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms