RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 TMEM132AQ24JP5 1023 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 KRT79Q5XKE5 535 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 DTHD1Q6ZMT9 781 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 CATSPER4Q7RTX7 472 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 RASSF8Q8NHQ8 419 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 CDK5RAP3Q96JB5 506 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 NACC1Q96RE7 527 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 TUFT1Q9NNX1 390 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 AAASQ9NRG9 546 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 ANKEF1Q9NU02 776 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 RANBP2P49792 3224 aaKnown RBP12.49□□□□□ -0.41
ARHGEF39-204ENST00000488918 ADGRA3Q8IWK6 1321 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 LCHNA4D1U4 455 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 ARHGEF35A5YM69 484 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 ERLIN2O94905 339 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 SLITRK3O94933 977 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 XRCC6P12956 609 aaKnown RBP eCLIP12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 DARSP14868 501 aaKnown RBP12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 CTNNB1P35222 781 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 ERVK-21P61565 698 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 HTRA4P83105 476 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 PTGDRQ13258 359 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 PAN2Q504Q3 1202 aaKnown RBP12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 TWF2Q6IBS0 349 aaKnown RBP12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 TMEM143Q96AN5 459 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 C11orf84Q9BUA3 381 aaPredicted RBP12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 OSBPL7Q9BZF2 842 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 CDHR5Q9HBB8 845 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 ERVK-5Q9HDB9 667 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 RGS18Q9NS28 235 aa12.48□□□□□ -0.41
ARHGEF39-204ENST00000488918 A0A087WZ62 844 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 LYPLA2O95372 231 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 BMP15O95972 392 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 SPIRE1Q08AE8 756 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 PDIA5Q14554 519 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 ZRSR1Q15695 479 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 BRAPQ7Z569 592 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 FAM228AQ86W67 206 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 TMEM192Q8IY95 271 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 CMTR2Q8IYT2 770 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 RNF149Q8NC42 400 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 MCPH1Q8NEM0 835 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 SNX29Q8TEQ0 813 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 PIGOQ8TEQ8 1089 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 PRPF31Q8WWY3 499 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 PPP2R3CQ969Q6 453 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 HSD17B14Q9BPX1 270 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 FDXACB1Q9BRP7 624 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 POLR3CQ9BUI4 534 aaPredicted RBP12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 TMEM60Q9H2L4 133 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 ADAMTS10Q9H324 1103 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 CHST12Q9NRB3 414 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 PIN4Q9Y237 131 aaKnown RBP12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 PCDHB12Q9Y5F1 795 aa12.47□□□□□ -0.41
ARHGEF39-204ENST00000488918 IGKV6-21A0A0C4DH24 114 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 TBKBP1A7MCY6 615 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 K7ELQ4 463 aaPredicted RBP12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 RFXAPO00287 272 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 DGKIO75912 1065 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 RB1P06400 928 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 MUTP22033 750 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 RPA1P27694 616 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 LAMTOR4Q0VGL1 99 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 GRB10Q13322 594 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 GPM6BQ13491 265 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 NBR1Q14596 966 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 AAK1Q2M2I8 961 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 EPC2Q52LR7 807 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 SRGAP1Q7Z6B7 1085 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 ZBTB8OSQ8IWT0 167 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 GDPD5Q8WTR4 605 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 TMEM40Q8WWA1 233 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 C17orf80Q9BSJ5 609 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 DHX33Q9H6R0 707 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 LMCD1Q9NZU5 365 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 DNM3Q9UQ16 869 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 PCDHB6Q9Y5E3 794 aa12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 MYH9P35579 1960 aaKnown RBP12.46□□□□□ -0.41
ARHGEF39-204ENST00000488918 INO80B-WBP1J3KQ70 363 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 CSDE1O75534 798 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 STBD1O95210 358 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 FGFR4P22455 802 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 PRPHP41219 470 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 RAB27AP51159 221 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 DRP2Q13474 957 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 BMS1Q14692 1282 aaKnown RBP12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 PCBP1Q15365 356 aaKnown RBP eCLIP12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 CATSPER3Q86XQ3 398 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 HACE1Q8IYU2 909 aa12.45□□□□□ -0.42
ARHGEF39-204ENST00000488918 LINC01465Q8N7H1 131 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms