RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 SUCLA2Q9P2R7 463 aaPredicted RBP19.57■□□□□ 0.72
ATG3-205ENST00000488910 REV3LO60673 3130 aa19.57■□□□□ 0.72
ATG3-205ENST00000488910 C9IYK1 514 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 WNT7AO00755 349 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 SLITRK3O94933 977 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 ZSCAN20P17040 1043 aaPredicted RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 YWHABP31946 246 aaKnown RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 RFC5P40937 340 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 TXKP42681 527 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 MRPS5P82675 430 aaKnown RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 DRP2Q13474 957 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 GPM6BQ13491 265 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 GNL2Q13823 731 aaKnown RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 DSC3Q14574 896 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 SKIV2LQ15477 1246 aaKnown RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 PLA2G4FQ68DD2 849 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 NEK9Q8TD19 979 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 SLC7A3Q8WY07 619 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 SYMPKQ92797 1274 aaKnown RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 HSD17B14Q9BPX1 270 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 EIF2AK1Q9BQI3 630 aaKnown RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 GCOM2Q9BZD3 368 aaPredicted RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 INO80BQ9C086 356 aaPredicted RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 ELAC1Q9H777 363 aaKnown RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 WRAP73Q9P2S5 460 aaPredicted RBP19.56■□□□□ 0.72
ATG3-205ENST00000488910 COG5Q9UP83 839 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 KIF3AQ9Y496 699 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 RALGAPA2Q2PPJ7 1873 aa19.56■□□□□ 0.72
ATG3-205ENST00000488910 GAS2O43903 313 aaKnown RBP19.55■□□□□ 0.72
ATG3-205ENST00000488910 LYPLA2O95372 231 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 LINC00271P0C7V0 271 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 ATP2B1P20020 1258 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 MCM7P33993 719 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 CTNNB1P35222 781 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 TRAPPC10P48553 1259 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 NPEPPSP55786 919 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 CTTNQ14247 550 aaKnown RBP19.55■□□□□ 0.72
ATG3-205ENST00000488910 TJAP1Q5JTD0 557 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 ZNF410Q86VK4 478 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 NLRC5Q86WI3 1866 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 NOSTRINQ8IVI9 506 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 TPH2Q8IWU9 490 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 MRPL38Q96DV4 380 aaKnown RBP19.55■□□□□ 0.72
ATG3-205ENST00000488910 TBC1D32Q96NH3 1257 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 PLVAPQ9BX97 442 aa19.55■□□□□ 0.72
ATG3-205ENST00000488910 DHX33Q9H6R0 707 aaKnown RBP19.55■□□□□ 0.72
ATG3-205ENST00000488910 COL4A4P53420 1690 aaPredicted RBP19.55■□□□□ 0.72
ATG3-205ENST00000488910 POLGP54098 1239 aaPredicted RBP19.54■□□□□ 0.72
ATG3-205ENST00000488910 CYP4A11Q02928 519 aa19.54■□□□□ 0.72
ATG3-205ENST00000488910 AAK1Q2M2I8 961 aa19.54■□□□□ 0.72
ATG3-205ENST00000488910 RHPN2Q8IUC4 686 aa19.54■□□□□ 0.72
ATG3-205ENST00000488910 ZNF668Q96K58 619 aaPredicted RBP19.54■□□□□ 0.72
ATG3-205ENST00000488910 ASB2Q96Q27 587 aa19.54■□□□□ 0.72
ATG3-205ENST00000488910 C11orf84Q9BUA3 381 aaPredicted RBP19.54■□□□□ 0.72
ATG3-205ENST00000488910 COL25A1Q9BXS0 654 aaPredicted RBP19.54■□□□□ 0.72
ATG3-205ENST00000488910 TMEM60Q9H2L4 133 aa19.54■□□□□ 0.72
ATG3-205ENST00000488910 TMEM161AQ9NX61 479 aa19.54■□□□□ 0.72
ATG3-205ENST00000488910 A0A087WZ62 844 aa19.53■□□□□ 0.72
ATG3-205ENST00000488910 U2AF2P26368 475 aaKnown RBP eCLIP19.53■□□□□ 0.72
ATG3-205ENST00000488910 NAALADL2Q58DX5 795 aa19.53■□□□□ 0.72
ATG3-205ENST00000488910 XKR9Q5GH70 373 aa19.53■□□□□ 0.72
ATG3-205ENST00000488910 ZNF579Q8NAF0 562 aaKnown RBP19.53■□□□□ 0.72
ATG3-205ENST00000488910 TCP11Q8WWU5 503 aa19.53■□□□□ 0.72
ATG3-205ENST00000488910 TMX3Q96JJ7 454 aa19.53■□□□□ 0.72
ATG3-205ENST00000488910 FDXACB1Q9BRP7 624 aaPredicted RBP19.53■□□□□ 0.72
ATG3-205ENST00000488910 ATP6V0A4Q9HBG4 840 aa19.53■□□□□ 0.72
ATG3-205ENST00000488910 CHST12Q9NRB3 414 aa19.53■□□□□ 0.72
ATG3-205ENST00000488910 ANKEF1Q9NU02 776 aa19.53■□□□□ 0.72
ATG3-205ENST00000488910 NOL7Q9UMY1 257 aaKnown RBP19.53■□□□□ 0.72
ATG3-205ENST00000488910 SPTBN5Q9NRC6 3674 aaKnown RBP19.53■□□□□ 0.72
ATG3-205ENST00000488910 ASAP2O43150 1006 aa19.52■□□□□ 0.72
ATG3-205ENST00000488910 XRCC6P12956 609 aaKnown RBP eCLIP19.52■□□□□ 0.72
ATG3-205ENST00000488910 ZNF174Q15697 407 aa19.52■□□□□ 0.72
ATG3-205ENST00000488910 PSPC1Q8WXF1 523 aaKnown RBP19.52■□□□□ 0.72
ATG3-205ENST00000488910 P2RX5Q93086 422 aa19.52■□□□□ 0.72
ATG3-205ENST00000488910 HLA-CQ95604 372 aa19.52■□□□□ 0.72
ATG3-205ENST00000488910 LMAN2LQ9H0V9 348 aa19.52■□□□□ 0.72
ATG3-205ENST00000488910 DACT1Q9NYF0 836 aa19.52■□□□□ 0.72
ATG3-205ENST00000488910 MRPL42Q9Y6G3 142 aaKnown RBP19.52■□□□□ 0.72
ATG3-205ENST00000488910 VCANP13611 3396 aa19.52■□□□□ 0.71
ATG3-205ENST00000488910 ZBTB39O15060 712 aa19.51■□□□□ 0.71
ATG3-205ENST00000488910 HOXA2O43364 376 aa19.51■□□□□ 0.71
ATG3-205ENST00000488910 IBSPP21815 317 aaPredicted RBP19.51■□□□□ 0.71
ATG3-205ENST00000488910 SFPQP23246 707 aaKnown RBP eCLIP19.51■□□□□ 0.71
ATG3-205ENST00000488910 PAN2Q504Q3 1202 aaKnown RBP19.51■□□□□ 0.71
ATG3-205ENST00000488910 TIGD5Q53EQ6 642 aa19.51■□□□□ 0.71
ATG3-205ENST00000488910 TTC38Q5R3I4 469 aa19.51■□□□□ 0.71
ATG3-205ENST00000488910 PRPF31Q8WWY3 499 aaKnown RBP19.51■□□□□ 0.71
ATG3-205ENST00000488910 COL4A3BPQ9Y5P4 624 aa19.51■□□□□ 0.71
ATG3-205ENST00000488910 A0A0U1RQF3 1178 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 TBKBP1A7MCY6 615 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 EOMESO95936 686 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 OR52Z1P0C646 297 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 EMC2Q15006 297 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 FAM102BQ5T8I3 360 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 ECHDC2Q86YB7 292 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 KSR1Q8IVT5 923 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 TMEM143Q96AN5 459 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 NLRP4Q96MN2 994 aa19.5■□□□□ 0.71
ATG3-205ENST00000488910 TUFT1Q9NNX1 390 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms