RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 RNF19AQ9NV58 838 aa12.91□□□□□ -0.34
SNU13-208ENST00000488571 RBM28Q9NW13 759 aaKnown RBP12.91□□□□□ -0.34
SNU13-208ENST00000488571 TMEM161AQ9NX61 479 aa12.91□□□□□ -0.34
SNU13-208ENST00000488571 BARHL2Q9NY43 387 aa12.91□□□□□ -0.34
SNU13-208ENST00000488571 V9GY48 417 aaPredicted RBP12.91□□□□□ -0.34
SNU13-208ENST00000488571 ZDBF2Q9HCK1 2354 aa12.91□□□□□ -0.34
SNU13-208ENST00000488571 MYH9P35579 1960 aaKnown RBP12.9□□□□□ -0.34
SNU13-208ENST00000488571 GPR182O15218 404 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 VTNP04004 478 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 CDC27P30260 824 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 PTPN5P54829 565 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 EXOSC10Q01780 885 aaKnown RBP12.9□□□□□ -0.34
SNU13-208ENST00000488571 SIGLEC14Q08ET2 396 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 ODR4Q5SWX8 454 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 PDE12Q6L8Q7 609 aaKnown RBP12.9□□□□□ -0.34
SNU13-208ENST00000488571 SWSAP1Q6NVH7 229 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 PDXDC2PQ6P474 469 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 LRRC55Q6ZSA7 311 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 PLA2G4DQ86XP0 818 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 PLPP6Q8IY26 295 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 RASGRP4Q8TDF6 673 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 ELAC1Q9H777 363 aaKnown RBP12.9□□□□□ -0.34
SNU13-208ENST00000488571 ATP6V0A4Q9HBG4 840 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 LHX6Q9UPM6 363 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 LZTS1Q9Y250 596 aa12.9□□□□□ -0.34
SNU13-208ENST00000488571 MAFBQ9Y5Q3 323 aaPredicted RBP12.9□□□□□ -0.34
SNU13-208ENST00000488571 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 HIDE1A8MVS5 230 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 IPO5O00410 1097 aaKnown RBP12.89□□□□□ -0.35
SNU13-208ENST00000488571 CYP3A4P08684 503 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 LAG3P18627 525 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 ZNF76P36508 570 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 VCPP55072 806 aaKnown RBP12.89□□□□□ -0.35
SNU13-208ENST00000488571 PLCB3Q01970 1234 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 PKN1Q16512 942 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 RTN1Q16799 776 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 JAKMIP3Q5VZ66 844 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 PLPP4Q5VZY2 271 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 ANKRD54Q6NXT1 300 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 MIS18BP1Q6P0N0 1132 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 SYCE2Q6PIF2 218 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 SYNE3Q6ZMZ3 975 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 SUGP1Q8IWZ8 645 aaKnown RBP12.89□□□□□ -0.35
SNU13-208ENST00000488571 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
SNU13-208ENST00000488571 CASD1Q96PB1 797 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 TMEM117Q9H0C3 514 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 ANO2Q9NQ90 1003 aa12.89□□□□□ -0.35
SNU13-208ENST00000488571 ZBTB43O43298 467 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 PBX3P40426 434 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 TECP42680 631 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 CLCN3P51790 818 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 IRX6P78412 446 aaPredicted RBP12.88□□□□□ -0.35
SNU13-208ENST00000488571 DSG2Q14126 1118 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 ADCK5Q3MIX3 580 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 KCNT2Q6UVM3 1135 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 METTL13Q8N6R0 699 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 PRRX2Q99811 253 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 TCF25Q9BQ70 676 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 ZNF577Q9BSK1 485 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 GLT8D2Q9H1C3 349 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 ADAMTS10Q9H324 1103 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 CDH22Q9UJ99 828 aa12.88□□□□□ -0.35
SNU13-208ENST00000488571 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
SNU13-208ENST00000488571 GOLGA8BA8MQT2 603 aa12.87□□□□□ -0.35
SNU13-208ENST00000488571 PFKFB3Q16875 520 aaPredicted RBP12.87□□□□□ -0.35
SNU13-208ENST00000488571 ZNF746Q6NUN9 644 aaPredicted RBP12.87□□□□□ -0.35
SNU13-208ENST00000488571 LLGL2Q6P1M3 1020 aa12.87□□□□□ -0.35
SNU13-208ENST00000488571 DHX32Q7L7V1 743 aaKnown RBP12.87□□□□□ -0.35
SNU13-208ENST00000488571 TRMT1LQ7Z2T5 733 aaKnown RBP12.87□□□□□ -0.35
SNU13-208ENST00000488571 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
SNU13-208ENST00000488571 PTCD2Q8WV60 388 aaKnown RBP12.87□□□□□ -0.35
SNU13-208ENST00000488571 APOL5Q9BWW9 433 aa12.87□□□□□ -0.35
SNU13-208ENST00000488571 ENTPD7Q9NQZ7 604 aa12.87□□□□□ -0.35
SNU13-208ENST00000488571 TBC1D22BQ9NU19 505 aa12.87□□□□□ -0.35
SNU13-208ENST00000488571 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 ESYT2A0FGR8 921 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 PDGFBP01127 241 aaPredicted RBP12.86□□□□□ -0.35
SNU13-208ENST00000488571 SP100P23497 879 aaPredicted RBP12.86□□□□□ -0.35
SNU13-208ENST00000488571 AVPR2P30518 371 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 NLRP11P59045 1033 aaKnown RBP12.86□□□□□ -0.35
SNU13-208ENST00000488571 SETQ01105 290 aaPredicted RBP12.86□□□□□ -0.35
SNU13-208ENST00000488571 TSGA10IPQ3SY00 556 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 CLLU1OSQ5K130 101 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 ECHDC2Q86YB7 292 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 SMAP1Q8IYB5 467 aaPredicted RBP12.86□□□□□ -0.35
SNU13-208ENST00000488571 LRRC43Q8N309 656 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 LENG9Q96B70 501 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 ZNF558Q96NG5 402 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 ZMYND12Q9H0C1 365 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 NGRNQ9NPE2 291 aaKnown RBP12.86□□□□□ -0.35
SNU13-208ENST00000488571 FAM86C1Q9NVL1 165 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 PUF60Q9UHX1 559 aaKnown RBP12.86□□□□□ -0.35
SNU13-208ENST00000488571 PCDHA10Q9Y5I2 948 aa12.86□□□□□ -0.35
SNU13-208ENST00000488571 PLXNA3P51805 1871 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms