RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ZNF287Q9HBT7 754 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 DIAPH3Q9NSV4 1193 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 ANAPC4Q9UJX5 808 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 FEM1BQ9UK73 627 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 ZHX1Q9UKY1 873 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-213ENST00000488386 ZNF536O15090 1300 aa6.95□□□□□ -1.3
CDHR3-213ENST00000488386 MYADML2A6NDP7 307 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 B4E1Z4 1266 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 RBAK-RBAKDNI3L0D1 243 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 SEPT4O43236 478 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 ADCY6O43306 1168 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 ORC4O43929 436 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 SNAI1O95863 264 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-213ENST00000488386 ZNF865P0CJ78 1059 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-213ENST00000488386 ALAS1P13196 640 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 ITGB7P26010 798 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 STAT2P52630 851 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 CNTN2Q02246 1040 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 ALX1Q15699 326 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 AKNAD1Q5T1N1 836 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 TMEM63BQ5T3F8 832 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 TTC22Q5TAA0 569 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 MFSD6Q6ZSS7 791 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 SV2BQ7L1I2 683 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 ANKRD35Q8N283 1001 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 C2CD4AQ8NCU7 369 aaPredicted RBP6.94□□□□□ -1.3
CDHR3-213ENST00000488386 STAG1Q8WVM7 1258 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 KCNB2Q92953 911 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 DDX11Q96FC9 970 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 TINF2Q9BSI4 451 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 CEP41Q9BYV8 373 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 CBX8Q9HC52 389 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 RNF146Q9NTX7 359 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 ATP11BQ9Y2G3 1177 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 PCDHGC5Q9Y5F6 944 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 NR2E3Q9Y5X4 410 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 TAF6LQ9Y6J9 622 aa6.94□□□□□ -1.3
CDHR3-213ENST00000488386 LRRC37A2A6NM11 1700 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-213ENST00000488386 ZNF213O14771 459 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 FGRP09769 529 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 ADCYAP1R1P41586 468 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 MAGEA10P43363 369 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-213ENST00000488386 ST13P50502 369 aaKnown RBP6.93□□□□□ -1.3
CDHR3-213ENST00000488386 RTP1P59025 263 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 PTH1RQ03431 593 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 LRRC41Q15345 812 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 TRIM60Q495X7 471 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 RCSD1Q6JBY9 416 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 NSMFQ6X4W1 530 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 ARMCX2Q7L311 632 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 EEPD1Q7L9B9 569 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 ABRAQ8N0Z2 381 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 C12orf50Q8NA57 414 aaPredicted RBP6.93□□□□□ -1.3
CDHR3-213ENST00000488386 GPBAR1Q8TDU6 330 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 UTP4Q969X6 686 aaKnown RBP6.93□□□□□ -1.3
CDHR3-213ENST00000488386 MYRFLQ96LU7 910 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 UBA5Q9GZZ9 404 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 PRO3102Q9H379 93 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 CYP4F12Q9HCS2 524 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 A1CFQ9NQ94 594 aaKnown RBP6.93□□□□□ -1.3
CDHR3-213ENST00000488386 XPNPEP3Q9NQH7 507 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 CACNA2D2Q9NY47 1150 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 SLC5A4Q9NY91 659 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 ASTN1O14525 1302 aa6.93□□□□□ -1.3
CDHR3-213ENST00000488386 CEP290O15078 2479 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 LTBP2Q14767 1821 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 DNAJC25-GNG10A0A024R161 153 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 KBTBD13C9JR72 458 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 DNM1LO00429 736 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 NFIBO00712 420 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 ATP2A1O14983 1001 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 DYRK3O43781 588 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 EIF4EBP3O60516 100 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-213ENST00000488386 PDHBP11177 359 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 TOP1P11387 765 aaKnown RBP6.92□□□□□ -1.3
CDHR3-213ENST00000488386 NOVP48745 357 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 PTPN11Q06124 597 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-213ENST00000488386 SOX4Q06945 474 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-213ENST00000488386 SGO2Q562F6 1265 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 SYDE2Q5VT97 1194 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 SLC30A10Q6XR72 485 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 CHST3Q7LGC8 479 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 FAM160B2Q86V87 743 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 CCDC144CPQ8IYA2 1237 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 CHURC1Q8WUH1 139 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 DCAF4Q8WV16 495 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 GDF15Q99988 308 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 ACAD9Q9H845 621 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 PRDM5Q9NQX1 630 aaPredicted RBP6.92□□□□□ -1.3
CDHR3-213ENST00000488386 PDGFCQ9NRA1 345 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 KRT82Q9NSB4 513 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 CCPG1Q9ULG6 757 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 ACTL7BQ9Y614 415 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 ZMYM6O95789 1325 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 SYNRGQ9UMZ2 1314 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 SZT2Q5T011 3432 aa6.92□□□□□ -1.3
CDHR3-213ENST00000488386 TRIOBPQ9H2D6 2365 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 TMPRSS2O15393 492 aa6.91□□□□□ -1.3
CDHR3-213ENST00000488386 SART1O43290 800 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms