RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 THNSL1Q8IYQ7 743 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 COLGALT1Q8NBJ5 622 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 RDM1Q8NG50 284 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 CASD1Q96PB1 797 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 TM6SF1Q9BZW5 370 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 TLR9Q9NR96 1032 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 PCDHGC5Q9Y5F6 944 aa17.27■□□□□ 0.36
TRIM50-203ENST00000488217 EOMESO95936 686 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 LAG3P18627 525 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 GPC3P51654 580 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 PLCB3Q01970 1234 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 PRKCEQ02156 737 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 TBC1D8BQ0IIM8 1120 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 UGCGQ16739 394 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 RNF135Q8IUD6 432 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 BLIDQ8IZY5 108 aa17.26■□□□□ 0.35
TRIM50-203ENST00000488217 ZNF668Q96K58 619 aaPredicted RBP17.26■□□□□ 0.35
TRIM50-203ENST00000488217 A0A0U1RQF3 1178 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 M0R2N6 131 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 STBD1O95210 358 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 DARSP14868 501 aaKnown RBP17.25■□□□□ 0.35
TRIM50-203ENST00000488217 XKR3Q5GH77 459 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 CPLX2Q6PUV4 134 aaKnown RBP17.25■□□□□ 0.35
TRIM50-203ENST00000488217 B3GNT9Q6UX72 402 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 ECHDC2Q86YB7 292 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 ABI1Q8IZP0 508 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
TRIM50-203ENST00000488217 SMRP1Q8NCR6 262 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 MRPS27Q92552 414 aaKnown RBP17.25■□□□□ 0.35
TRIM50-203ENST00000488217 MBOAT7Q96N66 472 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 CDCA3Q99618 268 aaPredicted RBP17.25■□□□□ 0.35
TRIM50-203ENST00000488217 RNF19AQ9NV58 838 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 HCSTQ9UBK5 93 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 LZTS1Q9Y250 596 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 MYO7AQ13402 2215 aa17.25■□□□□ 0.35
TRIM50-203ENST00000488217 DDX11L8A8MPP1 907 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 FSCN2O14926 492 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 TDP2O95551 362 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 DNM2P50570 870 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 KRT17Q04695 432 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 STK3Q13188 491 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 DUSP6Q16828 381 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 HERC4Q5GLZ8 1057 aaPredicted RBP17.24■□□□□ 0.35
TRIM50-203ENST00000488217 KCNT2Q6UVM3 1135 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 TMEM184AQ6ZMB5 413 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 NLRP7Q8WX94 980 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 SCLT1Q96NL6 688 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 GCOM2Q9BZD3 368 aaPredicted RBP17.24■□□□□ 0.35
TRIM50-203ENST00000488217 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
TRIM50-203ENST00000488217 CHST12Q9NRB3 414 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 PDRG1Q9NUG6 133 aa17.24■□□□□ 0.35
TRIM50-203ENST00000488217 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
TRIM50-203ENST00000488217 IGKV6-21A0A0C4DH24 114 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 CSDE1O75534 798 aaKnown RBP17.23■□□□□ 0.35
TRIM50-203ENST00000488217 GLP2RO95838 553 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 FGFR4P22455 802 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 DRP2Q13474 957 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 MTERF2Q49AM1 385 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 MOXD1Q6UVY6 613 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 DAGLBQ8NCG7 672 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 RNF169Q8NCN4 708 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 AIFM3Q96NN9 605 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 CEP89Q96ST8 783 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 SPG21Q9NZD8 308 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 SEPT9Q9UHD8 586 aaPredicted RBP17.23■□□□□ 0.35
TRIM50-203ENST00000488217 MUTYHQ9UIF7 546 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 C5orf42Q9H799 3197 aa17.23■□□□□ 0.35
TRIM50-203ENST00000488217 LOC730098B7Z3J9 87 aa17.22■□□□□ 0.35
TRIM50-203ENST00000488217 MAFO75444 373 aaPredicted RBP17.22■□□□□ 0.35
TRIM50-203ENST00000488217 HOXD11P31277 338 aaPredicted RBP17.22■□□□□ 0.35
TRIM50-203ENST00000488217 RBM10P98175 930 aaKnown RBP17.22■□□□□ 0.35
TRIM50-203ENST00000488217 NONOQ15233 471 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRIM50-203ENST00000488217 NPY5RQ15761 445 aa17.22■□□□□ 0.35
TRIM50-203ENST00000488217 CLLU1OSQ5K130 101 aa17.22■□□□□ 0.35
TRIM50-203ENST00000488217 ZNF598Q86UK7 904 aaKnown RBP17.22■□□□□ 0.35
TRIM50-203ENST00000488217 VN1R2Q8NFZ6 395 aa17.22■□□□□ 0.35
TRIM50-203ENST00000488217 ETNPPLQ8TBG4 499 aa17.22■□□□□ 0.35
TRIM50-203ENST00000488217 EDAQ92838 391 aa17.22■□□□□ 0.35
TRIM50-203ENST00000488217 ZNF558Q96NG5 402 aa17.22■□□□□ 0.35
TRIM50-203ENST00000488217 TCF25Q9BQ70 676 aa17.22■□□□□ 0.35
TRIM50-203ENST00000488217 SUCLA2Q9P2R7 463 aaPredicted RBP17.22■□□□□ 0.35
TRIM50-203ENST00000488217 DDX25Q9UHL0 483 aaKnown RBP17.22■□□□□ 0.35
TRIM50-203ENST00000488217 USP15Q9Y4E8 981 aaPredicted RBP17.22■□□□□ 0.35
TRIM50-203ENST00000488217 TMEM150BA6NC51 233 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 PPM1AP35813 382 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 PSMC5P62195 406 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 KCNC3Q14003 757 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 INF2Q27J81 1249 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 KRT25Q7Z3Z0 450 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 TMC7Q7Z402 723 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 LRRC43Q8N309 656 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 MRPL43Q8N983 215 aaKnown RBP17.21■□□□□ 0.35
TRIM50-203ENST00000488217 FAM20AQ96MK3 541 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 SH2D3AQ9BRG2 576 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 PHF7Q9BWX1 381 aaPredicted RBP17.21■□□□□ 0.35
TRIM50-203ENST00000488217 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
TRIM50-203ENST00000488217 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms