RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TANC1Q9C0D5 1861 aa19.09■□□□□ 0.65
SHROOM1-205ENST00000488072 PLA2G4BP0C869 781 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 SRGAP2CP0DJJ0 459 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 XRCC6P12956 609 aaKnown RBP eCLIP19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 GLRA2P23416 452 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 ARL2P36404 184 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 RFC5P40937 340 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 NAALADL2Q58DX5 795 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 PLEKHG4Q58EX7 1191 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 IER5Q5VY09 327 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 FAM228AQ86W67 206 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 NME8Q8N427 588 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 PDILTQ8N807 584 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 LINC01599Q8WXQ3 324 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 SLC7A3Q8WY07 619 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 CCDC43Q96MW1 224 aaKnown RBP19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 MAP7D2Q96T17 732 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 CCSER1Q9C0I3 900 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 TMX1Q9H3N1 280 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 ATP6V0A4Q9HBG4 840 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 DNM3Q9UQ16 869 aa19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 MORC2Q9Y6X9 1032 aaPredicted RBP19.08■□□□□ 0.64
SHROOM1-205ENST00000488072 SOX1O00570 391 aaPredicted RBP19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 CUTAO60888 179 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 CAND2O75155 1236 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 CYP11B2P19099 503 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 TMOD1P28289 359 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 RFC2P35250 354 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 ME1P48163 572 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 SLC12A3P55017 1021 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 DEFB103AP81534 67 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 LAMTOR4Q0VGL1 99 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 ARSHQ5FYA8 562 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 FAM102BQ5T8I3 360 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 RINT1Q6NUQ1 792 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 RTN4RL1Q86UN2 441 aaPredicted RBP19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 DAW1Q8N136 415 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 CDK5RAP3Q96JB5 506 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 SPATA32Q96LK8 384 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 MINDY3Q9H8M7 445 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 PADI3Q9ULW8 664 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 ARID2Q68CP9 1835 aa19.07■□□□□ 0.64
SHROOM1-205ENST00000488072 SFI1A8K8P3 1242 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 ZBBXA8MT70 800 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 MGEA5O60502 916 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 DGAT1O75907 488 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 IBSPP21815 317 aaPredicted RBP19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 MUTP22033 750 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 KRT85P78386 507 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 RASIP1Q5U651 963 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 C1orf186Q6ZWK4 172 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 RPUSD2Q8IZ73 545 aaKnown RBP19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 TDHQ8IZJ6 230 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 RASSF8Q8NHQ8 419 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 NLRP7Q8WX94 980 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 RAD54LQ92698 747 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 STAMQ92783 540 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 CALML4Q96GE6 196 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 RNPC3Q96LT9 517 aaKnown RBP19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 KIFC3Q9BVG8 833 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 IFIH1Q9BYX4 1025 aaKnown RBP19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 ERVK-5Q9HDB9 667 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 CFAP45Q9UL16 551 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 USP20Q9Y2K6 914 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 COL4A3BPQ9Y5P4 624 aa19.06■□□□□ 0.64
SHROOM1-205ENST00000488072 KDM3AQ9Y4C1 1321 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 RANBP2P49792 3224 aaKnown RBP19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 CRYBB1P53674 252 aaPredicted RBP19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 NFX1Q12986 1120 aaKnown RBP19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 MAPK7Q13164 816 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 CAPSQ13938 189 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 ATL3Q6DD88 541 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 CNKSR3Q6P9H4 555 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 PSRC1Q6PGN9 363 aaPredicted RBP19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 SYT2Q8N9I0 419 aaPredicted RBP19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 KCNG4Q8TDN1 519 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 HERVK_113Q902F9 699 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 SCLT1Q96NL6 688 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 IFT122Q9HBG6 1241 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 ST3GAL5Q9UNP4 418 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 STK24Q9Y6E0 443 aa19.05■□□□□ 0.64
SHROOM1-205ENST00000488072 M0QZ92 97 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 HIP1RO75146 1068 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 RPS6KA5O75582 802 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 DARSP14868 501 aaKnown RBP19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 DNM2P50570 870 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 RABGGTBP53611 331 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 RRAGBQ5VZM2 374 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 FAM117BQ6P1L5 589 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 TSHZ1Q6ZSZ6 1077 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 RNF149Q8NC42 400 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 PSPC1Q8WXF1 523 aaKnown RBP19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 SEPT8Q92599 483 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 IPO9Q96P70 1041 aaKnown RBP19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 TRIOBPQ9H2D6 2365 aa19.04■□□□□ 0.64
SHROOM1-205ENST00000488072 A0A1B0GVL5 298 aa19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 EDN1P05305 212 aa19.03■□□□□ 0.64
SHROOM1-205ENST00000488072 PBX2P40425 430 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms