RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 MKS1Q9NXB0 559 aa4.43□□□□□ -1.7
HFM1-208ENST00000488023 F8W031 263 aaPredicted RBP4.42□□□□□ -1.7
HFM1-208ENST00000488023 AP1G1O43747 822 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 NOBOXO60393 691 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 NPHS1O60500 1241 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 ZRANB2O95218 330 aaKnown RBP eCLIP4.42□□□□□ -1.71e-8■■■■□ 21.4
HFM1-208ENST00000488023 CPP00450 1065 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 SRGAP2CP0DJJ0 459 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 CNR2P34972 360 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 SARSP49591 514 aaKnown RBP4.42□□□□□ -1.7
HFM1-208ENST00000488023 SCAND1P57086 179 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 DLX2Q07687 328 aaPredicted RBP4.42□□□□□ -1.7
HFM1-208ENST00000488023 LONRF1Q17RB8 773 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 MBLAC2Q68D91 279 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 CCDC70Q6NSX1 233 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 MTDHQ86UE4 582 aaKnown RBP4.42□□□□□ -1.7
HFM1-208ENST00000488023 FAM186BQ8IYM0 893 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 LZTR1Q8N653 840 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 TEX19Q8NA77 164 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 SLC35G2Q8TBE7 412 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 TRMT2BQ96GJ1 504 aaKnown RBP4.42□□□□□ -1.7
HFM1-208ENST00000488023 TNIP3Q96KP6 325 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 NEUROD6Q96NK8 337 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 SCLT1Q96NL6 688 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 SMPD4Q9NXE4 827 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 C9orf78Q9NZ63 289 aaPredicted RBP4.42□□□□□ -1.7
HFM1-208ENST00000488023 DBR1Q9UK59 544 aaKnown RBP4.42□□□□□ -1.7
HFM1-208ENST00000488023 NUDT5Q9UKK9 219 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 ZKSCAN5Q9Y2L8 839 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 PCDHGB3Q9Y5G1 929 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 SCINQ9Y6U3 715 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 WASHC2AQ641Q2 1341 aa4.42□□□□□ -1.7
HFM1-208ENST00000488023 NPHP3-ACAD11A0A0J9YXS1 232 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 ABHD14A-ACY1A0A1B0GW23 586 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 F5H423 210 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 AQP7O14520 342 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 CTNND1O60716 968 aaKnown RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 PPP1R11O60927 126 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 ULK1O75385 1050 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 GLI4P10075 376 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 COL6A1P12109 1028 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 C6P13671 934 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 PLS3P13797 630 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 SLC5A1P13866 664 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 TGM1P22735 817 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 TACR1P25103 407 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 GDF5P43026 501 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 ALDH5A1P51649 535 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 GJA9P57773 515 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 LRRC32Q14392 662 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 LLGL1Q15334 1064 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 TUBB8Q3ZCM7 444 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 ALFQ53S48 1182 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 IFIT1BQ5T764 474 aaKnown RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 ZNF354CQ86Y25 554 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 ZC3H7AQ8IWR0 971 aaKnown RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 NETO2Q8NC67 525 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 POF1BQ8WVV4 589 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 DIO2Q92813 273 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 TAAR9Q96RI9 348 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 RBM15Q96T37 977 aaKnown RBP eCLIP4.41□□□□□ -1.7
HFM1-208ENST00000488023 MMP19Q99542 508 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 INO80BQ9C086 356 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 RNF38Q9H0F5 515 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 NMRK2Q9NPI5 230 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 GTF2A1LQ9UNN4 478 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 TPP1O14773 563 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 ZNF500O60304 480 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 CFBP00751 764 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 CKMP06732 381 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 LDHCP07864 332 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 SETSIPP0DME0 302 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 TYRP1P17643 537 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 RHCEP18577 417 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 MAN1A1P33908 653 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 RENBPP51606 427 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 KPNA1P52294 538 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 PRR5P85299 388 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 RHDQ02161 417 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 TRIM14Q14142 442 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 CLUL1Q15846 466 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 DDB1Q16531 1140 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 INF2Q27J81 1249 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 TMEM177Q53S58 311 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 RRP12Q5JTH9 1297 aaKnown RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 BROXQ5VW32 411 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 CHST15Q7LFX5 561 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 C11orf74Q86VG3 221 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 CPNE8Q86YQ8 564 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 CARFQ8N187 725 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 Q8N1X5 172 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 GPATCH11Q8N954 259 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 DCAF4Q8WV16 495 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 SLC5A5Q92911 643 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 TSPAN17Q96FV3 270 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 NUP88Q99567 741 aaPredicted RBP4.41□□□□□ -1.7
HFM1-208ENST00000488023 PHF20Q9BVI0 1012 aa4.41□□□□□ -1.7
HFM1-208ENST00000488023 CDIP1Q9H305 208 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms