RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 EMC2Q15006 297 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 SYCP1Q15431 976 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 MTERF2Q49AM1 385 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 MORN1Q5T089 497 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 FKBP15Q5T1M5 1219 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 TMEM63BQ5T3F8 832 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 C17orf99Q6UX52 265 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 HAUS6Q7Z4H7 955 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 FRMD5Q7Z6J6 570 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 CNGA4Q8IV77 575 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 DHX37Q8IY37 1157 aaKnown RBP10.38□□□□□ -0.75
SF3B1-211ENST00000487698 SPIRE2Q8WWL2 714 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 COPS5Q92905 334 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 HHIPL1Q96JK4 782 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 NTPCRQ9BSD7 190 aaKnown RBP10.38□□□□□ -0.75
SF3B1-211ENST00000487698 GBP3Q9H0R5 595 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 AGPAT3Q9NRZ7 376 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 DMAC2Q9NW81 257 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
SF3B1-211ENST00000487698 SIK3Q9Y2K2 1263 aa10.38□□□□□ -0.75
SF3B1-211ENST00000487698 RNF225M0QZC1 329 aaPredicted RBP10.37□□□□□ -0.75
SF3B1-211ENST00000487698 PES1O00541 588 aaKnown RBP10.37□□□□□ -0.75
SF3B1-211ENST00000487698 TLR2O60603 784 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 AKAP3O75969 853 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 NPTX2P47972 431 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 PEX3P56589 373 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 SOX10P56693 466 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 DMP1Q13316 513 aaPredicted RBP10.37□□□□□ -0.75
SF3B1-211ENST00000487698 FIGNQ5HY92 759 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 HS2ST1Q7LGA3 356 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 PLPPR4Q7Z2D5 763 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 DPP9Q86TI2 863 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 SLC9A9Q8IVB4 645 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 RETREG2Q8NC44 543 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 SMC1BQ8NDV3 1235 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 TMEM161BQ8NDZ6 487 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 GOLGA5Q8TBA6 731 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 KCNN1Q92952 543 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 EMID1Q96A84 441 aaPredicted RBP10.37□□□□□ -0.75
SF3B1-211ENST00000487698 HVCN1Q96D96 273 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 CCDC51Q96ER9 411 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 FAM167AQ96KS9 214 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 SPATA33Q96N06 139 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 TMEM206Q9H813 350 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 PPME1Q9Y570 386 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 ZSWIM8A7E2V4 1837 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 ADGRA3Q8IWK6 1321 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 NOP56O00567 594 aaKnown RBP10.37□□□□□ -0.75
SF3B1-211ENST00000487698 CLIC2O15247 247 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 SLC16A4O15374 487 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 NRDCO43847 1150 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 STX10O60499 249 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 RFC5P40937 340 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 CASP4P49662 377 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 MYBPC2Q14324 1141 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 TRIM50Q86XT4 487 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 C12orf56Q8IXR9 622 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 MSL3Q8N5Y2 521 aaKnown RBP10.37□□□□□ -0.75
SF3B1-211ENST00000487698 NPLOC4Q8TAT6 608 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 CPLX3Q8WVH0 158 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 BORCS6Q96GS4 357 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 ACCSQ96QU6 501 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 BAG1Q99933 345 aaPredicted RBP10.37□□□□□ -0.75
SF3B1-211ENST00000487698 TINF2Q9BSI4 451 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 MKNK1Q9BUB5 465 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 AZI2Q9H6S1 392 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 CGNQ9P2M7 1197 aaKnown RBP10.37□□□□□ -0.75
SF3B1-211ENST00000487698 FAM184BQ9ULE4 1060 aa10.37□□□□□ -0.75
SF3B1-211ENST00000487698 TTC26A0AVF1 554 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 ARHGAP6O43182 974 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 TPM1P09493 284 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 HOXC6P09630 235 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 KLK7P49862 253 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 SLC26A2P50443 739 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 SMTNP53814 917 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 POLGP54098 1239 aaPredicted RBP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 SNRPFP62306 86 aaKnown RBP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 PPP2R3AQ06190 1150 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 SREBF2Q12772 1141 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 E4F1Q66K89 784 aaPredicted RBP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 MAP4K3Q8IVH8 894 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 ATP8B4Q8TF62 1192 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 BBXQ8WY36 941 aaPredicted RBP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 USP6NLQ92738 828 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 IQCDQ96DY2 449 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 DNAJC7Q99615 494 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 NUP58Q9BVL2 599 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 NAA15Q9BXJ9 866 aaKnown RBP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 POLR3FQ9H1D9 316 aaPredicted RBP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 METTL14Q9HCE5 456 aaKnown RBP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 NRBP2Q9NSY0 501 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 ABHD10Q9NUJ1 306 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 ARMCX3Q9UH62 379 aaPredicted RBP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 CAPN11Q9UMQ6 739 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.36□□□□□ -0.75
SF3B1-211ENST00000487698 A0A1W2PQJ5 194 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 ZBTB42B2RXF5 422 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 GH1P01241 217 aa10.36□□□□□ -0.75
SF3B1-211ENST00000487698 EPB41P11171 864 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms