RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 KRT17Q04695 432 aa18.6■□□□□ 0.57
TOM1-214ENST00000487670 PUM1Q14671 1186 aaKnown RBP eCLIP18.6■□□□□ 0.57
TOM1-214ENST00000487670 TRMT1LQ7Z2T5 733 aaKnown RBP18.6■□□□□ 0.57
TOM1-214ENST00000487670 VPS52Q8N1B4 723 aa18.6■□□□□ 0.57
TOM1-214ENST00000487670 PLCD3Q8N3E9 789 aa18.6■□□□□ 0.57
TOM1-214ENST00000487670 ST13P5Q8NFI4 369 aaPredicted RBP18.6■□□□□ 0.57
TOM1-214ENST00000487670 RRP36Q96EU6 259 aaKnown RBP18.6■□□□□ 0.57
TOM1-214ENST00000487670 MXRA8Q9BRK3 442 aa18.6■□□□□ 0.57
TOM1-214ENST00000487670 PSTPIP2Q9H939 334 aa18.6■□□□□ 0.57
TOM1-214ENST00000487670 CA14Q9ULX7 337 aa18.6■□□□□ 0.57
TOM1-214ENST00000487670 TDRD15B5MCY1 1934 aaKnown RBP18.6■□□□□ 0.57
TOM1-214ENST00000487670 NFASCO94856 1347 aa18.59■□□□□ 0.57
TOM1-214ENST00000487670 POTEMA6NI47 508 aa18.59■□□□□ 0.57
TOM1-214ENST00000487670 DCNP07585 359 aaKnown RBP18.59■□□□□ 0.57
TOM1-214ENST00000487670 CRYBB1P53674 252 aaPredicted RBP18.59■□□□□ 0.57
TOM1-214ENST00000487670 SPECC1Q5M775 1068 aa18.59■□□□□ 0.57
TOM1-214ENST00000487670 ATAT1Q5SQI0 421 aa18.59■□□□□ 0.57
TOM1-214ENST00000487670 POTEGQ6S5H5 508 aa18.59■□□□□ 0.57
TOM1-214ENST00000487670 IGDCC4Q8TDY8 1250 aa18.59■□□□□ 0.57
TOM1-214ENST00000487670 HINFPQ9BQA5 517 aa18.59■□□□□ 0.57
TOM1-214ENST00000487670 RTP3Q9BQQ7 232 aa18.59■□□□□ 0.57
TOM1-214ENST00000487670 AGO4Q9HCK5 861 aaKnown RBP18.59■□□□□ 0.57
TOM1-214ENST00000487670 RSPO4Q2I0M5 234 aaPredicted RBP18.58■□□□□ 0.56
TOM1-214ENST00000487670 LONRF3Q496Y0 759 aa18.58■□□□□ 0.56
TOM1-214ENST00000487670 ABHD15Q6UXT9 468 aa18.58■□□□□ 0.56
TOM1-214ENST00000487670 ZNF598Q86UK7 904 aaKnown RBP18.58■□□□□ 0.56
TOM1-214ENST00000487670 ZNF654Q8IZM8 581 aa18.58■□□□□ 0.56
TOM1-214ENST00000487670 LY9Q9HBG7 655 aa18.58■□□□□ 0.56
TOM1-214ENST00000487670 DZANK1Q9NVP4 752 aa18.58■□□□□ 0.56
TOM1-214ENST00000487670 RALGAPA1Q6GYQ0 2036 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 MEIS3P2A8K0S8 358 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 E7EWF7 191 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 HBP1O60381 514 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 LRRN2O75325 713 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 MYBP10242 640 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 TYW1BQ6NUM6 668 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 CATIPQ7Z7H3 387 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 GPR149Q86SP6 731 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 ABI1Q8IZP0 508 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 DLGAP2Q9P1A6 1054 aa18.57■□□□□ 0.56
TOM1-214ENST00000487670 COL1A2P08123 1366 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 SPDYE3A6NKU9 549 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 STK25O00506 426 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 BACH1O14867 736 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 ZC3H11AO75152 810 aaKnown RBP eCLIP18.56■□□□□ 0.56
TOM1-214ENST00000487670 CSDE1O75534 798 aaKnown RBP18.56■□□□□ 0.56
TOM1-214ENST00000487670 SP9P0CG40 484 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 GLULP15104 373 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 HDAC1Q13547 482 aaPredicted RBP18.56■□□□□ 0.56
TOM1-214ENST00000487670 CCDC149Q6ZUS6 474 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 CABP7Q86V35 215 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 LRRC71Q8N4P6 559 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 METTL13Q8N6R0 699 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 LPPQ93052 612 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 SDF4Q9BRK5 362 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 ADAMTS10Q9H324 1103 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 TBC1D17Q9HA65 648 aa18.56■□□□□ 0.56
TOM1-214ENST00000487670 SEC63Q9UGP8 760 aaKnown RBP18.56■□□□□ 0.56
TOM1-214ENST00000487670 CTSAP10619 480 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 NLRP11P59045 1033 aaKnown RBP18.55■□□□□ 0.56
TOM1-214ENST00000487670 PDXDC2PQ6P474 469 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 MB21D2Q8IYB1 491 aaPredicted RBP18.55■□□□□ 0.56
TOM1-214ENST00000487670 MAML2Q8IZL2 1156 aaPredicted RBP18.55■□□□□ 0.56
TOM1-214ENST00000487670 CCDC82Q8N4S0 544 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 LINC01465Q8N7H1 131 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 SUMF1Q8NBK3 374 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 ACSF2Q96CM8 615 aaPredicted RBP18.55■□□□□ 0.56
TOM1-214ENST00000487670 TMEM169Q96HH4 297 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 OSBPL3Q9H4L5 887 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 DNAJB4Q9UDY4 337 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 BAHCC1Q9P281 2608 aa18.55■□□□□ 0.56
TOM1-214ENST00000487670 FRYQ5TBA9 3013 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 ERICH2A1L162 156 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 MAFGO15525 162 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 HOXA2O43364 376 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 SSBP05455 408 aaKnown RBP eCLIP18.54■□□□□ 0.56
TOM1-214ENST00000487670 TRDNQ13061 729 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 PTPN14Q15678 1187 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 ZNF484Q5JVG2 852 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 SWSAP1Q6NVH7 229 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 OTOP3Q7RTS5 596 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 CTCFLQ8NI51 663 aaPredicted RBP18.54■□□□□ 0.56
TOM1-214ENST00000487670 MYADMQ96S97 322 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 FOXQ1Q9C009 403 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 SFXN1Q9H9B4 322 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 ZNF302Q9NR11 478 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 RNF216Q9NWF9 866 aaPredicted RBP18.54■□□□□ 0.56
TOM1-214ENST00000487670 NOTCH4Q99466 2003 aa18.54■□□□□ 0.56
TOM1-214ENST00000487670 ADAMTS3O15072 1205 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 DHX15O43143 795 aaKnown RBP18.53■□□□□ 0.56
TOM1-214ENST00000487670 CLCN4P51793 760 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 LETM2Q2VYF4 491 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 ODR4Q5SWX8 454 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 GPR152Q8TDT2 470 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 RUBCNQ92622 972 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 IGSF21Q96ID5 467 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 NRDE2Q9H7Z3 1164 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 RALYQ9UKM9 306 aaKnown RBP18.53■□□□□ 0.56
TOM1-214ENST00000487670 AKT3Q9Y243 479 aa18.53■□□□□ 0.56
TOM1-214ENST00000487670 IRAK3Q9Y616 596 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms