RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 ARL2P36404 184 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 DNM2P50570 870 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 NLRP11P59045 1033 aaKnown RBP12.98□□□□□ -0.33
CLIP2-207ENST00000487447 POU5F1BQ06416 359 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 KIZQ2M2Z5 673 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 OTOP2Q7RTS6 562 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 KCNK18Q7Z418 384 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 CABP7Q86V35 215 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
CLIP2-207ENST00000487447 MCPH1Q8NEM0 835 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 PSPC1Q8WXF1 523 aaKnown RBP12.98□□□□□ -0.33
CLIP2-207ENST00000487447 SEPT8Q92599 483 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 CSRNP2Q9H175 543 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 ATP6V0A4Q9HBG4 840 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 ERVK-5Q9HDB9 667 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 SUCLA2Q9P2R7 463 aaPredicted RBP12.98□□□□□ -0.33
CLIP2-207ENST00000487447 AKT3Q9Y243 479 aa12.98□□□□□ -0.33
CLIP2-207ENST00000487447 A0A087WWV3 80 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 E9PMD0 336 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 SPTLC2O15270 562 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 ASAP2O43150 1006 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 DARSP14868 501 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 CYP11B2P19099 503 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 EIF4BP23588 611 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 MARCKSP29966 332 aaPredicted RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 UBA7P41226 1012 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 WDR5P61964 334 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 NUCB2P80303 420 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 SMAD3P84022 425 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 CEBPZQ03701 1054 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 IKBKEQ14164 716 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 FAM228AQ86W67 206 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 KRI1Q8N9T8 703 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 PHOSPHO2Q8TCD6 241 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 KCNG4Q8TDN1 519 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 LRRC15Q8TF66 581 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 SLC9A7Q96T83 725 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 OSMRQ99650 979 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 NFKBIZQ9BYH8 718 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 BHMT2Q9H2M3 363 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 IFT122Q9HBG6 1241 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 TFIP11Q9UBB9 837 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 RCOR1Q9UKL0 485 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 CFAP45Q9UL16 551 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 PADI3Q9ULW8 664 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 DNM3Q9UQ16 869 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 NOC2LQ9Y3T9 749 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 COL4A3BPQ9Y5P4 624 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 TCHHQ07283 1943 aa12.97□□□□□ -0.33
CLIP2-207ENST00000487447 LAMA2P24043 3122 aaKnown RBP12.97□□□□□ -0.33
CLIP2-207ENST00000487447 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 ARHGEF35A5YM69 484 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 USO1O60763 962 aaKnown RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 CD52P31358 61 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 DNM1Q05193 864 aaKnown RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 MXD4Q14582 209 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 STK38Q15208 465 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 ODR4Q5SWX8 454 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 AXDND1Q5T1B0 1012 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 FOXD4L5Q5VV16 416 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 USP49Q70CQ1 688 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 RHPN2Q8IUC4 686 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 CRIPAKQ8N1N5 446 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 SYT2Q8N9I0 419 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 LINC01599Q8WXQ3 324 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 FOXD4L4Q8WXT5 416 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 MYLIPQ8WY64 445 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 TMEM143Q96AN5 459 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 CLIC6Q96NY7 704 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 FTHL17Q9BXU8 183 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 TTYH1Q9H313 450 aaPredicted RBP12.96□□□□□ -0.33
CLIP2-207ENST00000487447 TMX1Q9H3N1 280 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 BLOC1S4Q9NUP1 217 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 SLC4A7Q9Y6M7 1214 aa12.96□□□□□ -0.33
CLIP2-207ENST00000487447 A0A087WZ62 844 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-207ENST00000487447 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-207ENST00000487447 RBAK-RBAKDNI3L0D1 243 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 GPR182O15218 404 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 CUTAO60888 179 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 GLRA2P23416 452 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 GUCY2CP25092 1073 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 SLC12A3P55017 1021 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 LAMTOR4Q0VGL1 99 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 PAK2Q13177 524 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 CAPSQ13938 189 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 DSC3Q14574 896 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 C1orf186Q6ZWK4 172 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 KSR1Q8IVT5 923 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 ASAP3Q8TDY4 903 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 SYMPKQ92797 1274 aaKnown RBP12.95□□□□□ -0.34
CLIP2-207ENST00000487447 CALML4Q96GE6 196 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 EPSTI1Q96J88 318 aa12.95□□□□□ -0.34
CLIP2-207ENST00000487447 FDXACB1Q9BRP7 624 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-207ENST00000487447 TIPINQ9BVW5 301 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms