RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 PTPN21Q16825 1174 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 UTP14CQ5TAP6 766 aaKnown RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 PADI6Q6TGC4 694 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 TRMT1LQ7Z2T5 733 aaKnown RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 TRIM50Q86XT4 487 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 ZC3H3Q8IXZ2 948 aaKnown RBP15.66■□□□□ 0.1
CUX1-209ENST00000487284 PARVGQ9HBI0 331 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 ZNF302Q9NR11 478 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 BRCA2P51587 3418 aa15.66■□□□□ 0.1
CUX1-209ENST00000487284 EMSYQ7Z589 1322 aa15.65■□□□□ 0.1
CUX1-209ENST00000487284 EIF3DO15371 548 aaKnown RBP eCLIP15.65■□□□□ 0.1
CUX1-209ENST00000487284 DKC1O60832 514 aaKnown RBP eCLIP15.65■□□□□ 0.1
CUX1-209ENST00000487284 DUSP11O75319 330 aaKnown RBP15.65■□□□□ 0.1
CUX1-209ENST00000487284 MMP3P08254 477 aa15.65■□□□□ 0.1
CUX1-209ENST00000487284 PRKCEQ02156 737 aa15.65■□□□□ 0.1
CUX1-209ENST00000487284 CTU1Q7Z7A3 348 aaKnown RBP15.65■□□□□ 0.1
CUX1-209ENST00000487284 ATP6V0A1Q93050 837 aa15.65■□□□□ 0.1
CUX1-209ENST00000487284 MAFBQ9Y5Q3 323 aaPredicted RBP15.65■□□□□ 0.1
CUX1-209ENST00000487284 FRMPD3Q5JV73 1810 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 UBE4BO95155 1302 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 TMEM150BA6NC51 233 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 A6NJR5 290 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 LGR5O75473 907 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 LGALS2P05162 132 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 RARBP10826 455 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 HOXD8P13378 290 aaPredicted RBP15.64■□□□□ 0.09
CUX1-209ENST00000487284 ATP4AP20648 1035 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 HOXD13P35453 343 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 STAT5BP51692 787 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 FKBP3Q00688 224 aaKnown RBP15.64■□□□□ 0.09
CUX1-209ENST00000487284 EDRF1Q3B7T1 1238 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 FAM160B1Q5W0V3 765 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 DAW1Q8N136 415 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 ZNF507Q8TCN5 953 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 AFAP1L1Q8TED9 768 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 GLG1Q92896 1179 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 CEP63Q96MT8 703 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 FIZ1Q96SL8 496 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 TUBGCP2Q9BSJ2 902 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 TIPINQ9BVW5 301 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 AP5M1Q9H0R1 490 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 AZI2Q9H6S1 392 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 MRPL44Q9H9J2 332 aaKnown RBP15.64■□□□□ 0.09
CUX1-209ENST00000487284 Q9Y3F1 56 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 SIP14410 1827 aa15.64■□□□□ 0.09
CUX1-209ENST00000487284 A0A1W2PQC6 194 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 HIP1RO75146 1068 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 STBD1O95210 358 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 ZNF286BP0CG31 522 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 MYBP10242 640 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 SKILP12757 684 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 BEX3Q00994 111 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 KNOP1Q1ED39 458 aaKnown RBP15.63■□□□□ 0.09
CUX1-209ENST00000487284 SLC9C1Q4G0N8 1177 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 MYCT1Q8N699 235 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 EEF2KMTQ96G04 330 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 SH2D3AQ9BRG2 576 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 HMX1Q9NP08 348 aaPredicted RBP15.63■□□□□ 0.09
CUX1-209ENST00000487284 SPTLC3Q9NUV7 552 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 TRAF3IP3Q9Y228 551 aa15.63■□□□□ 0.09
CUX1-209ENST00000487284 MYADML2A6NDP7 307 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 SFI1A8K8P3 1242 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 PDXKO00764 312 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 PPFIA4O75335 1185 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 GCNT3O95395 438 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 PGK1P00558 417 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 TPM2P07951 284 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 C6orf222P0C671 652 aaPredicted RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 MTIF2P46199 727 aaKnown RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 DNM2P50570 870 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 GJA9P57773 515 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 FSCN1Q16658 493 aaKnown RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 DGKDQ16760 1214 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 MIIPQ5JXC2 388 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 PLA2G4FQ68DD2 849 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 ANO5Q75V66 913 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 CREBRFQ8IUR6 639 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 CCDC112Q8NEF3 446 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 CCDC43Q96MW1 224 aaKnown RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 TMX1Q9H3N1 280 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 POLD4Q9HCU8 107 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 DDX20Q9UHI6 824 aaKnown RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 ZMYM2Q9UBW7 1377 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 ADAMTS4O75173 837 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 PRPF6O94906 941 aaKnown RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 OATP04181 439 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 MAPTP10636 758 aaKnown RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 PRKCSHP14314 528 aaPredicted RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 MARK3P27448 753 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 KCNJ6P48051 423 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 CPT1AP50416 773 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 MARSP56192 900 aaKnown RBP15.62■□□□□ 0.09
CUX1-209ENST00000487284 UBXN1Q04323 297 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 XKR9Q5GH70 373 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 XKR3Q5GH77 459 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 ODR4Q5SWX8 454 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 STXBP4Q6ZWJ1 553 aa15.62■□□□□ 0.09
CUX1-209ENST00000487284 PLPPR4Q7Z2D5 763 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms