RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PACSIN2Q9UNF0 486 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 DDX39AO00148 427 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 NFKBIEO00221 500 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 NFIBO00712 420 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 WNT10BO00744 389 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 GFPT2O94808 682 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 DNA2P51530 1060 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 CYP2J2P51589 502 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 MRPS25P82663 173 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 SND1Q7KZF4 910 aaKnown RBP eCLIP19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 SLC9A9Q8IVB4 645 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 PRPF38AQ8NAV1 312 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 HOOK2Q96ED9 719 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 CALCOCO1Q9P1Z2 691 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 INTUQ9ULD6 942 aa19.61■□□□□ 0.73
PDLIM7-207ENST00000486828 FER1L6Q2WGJ9 1857 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 PHF20L1A8MW92 1017 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 WDR46O15213 610 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 P4HBP07237 508 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 YBX3P16989 372 aaKnown RBP eCLIP19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 SOX5P35711 763 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 MYBPC2Q14324 1141 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 TNIP1Q15025 636 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 RPS6KA1Q15418 735 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 NBPF9Q3BBW0 867 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 EMBQ6PCB8 327 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 PADI6Q6TGC4 694 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 LRRC57Q8N9N7 239 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 TAF4BQ92750 862 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 STK33Q9BYT3 514 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 TAOK3Q9H2K8 898 aa19.6■□□□□ 0.73
PDLIM7-207ENST00000486828 A0A0A6YYK5 440 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 F8VZ95 297 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 AGPSO00116 658 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 DDX3XO00571 662 aaKnown RBP eCLIP19.59■□□□□ 0.731e-16■■■□□ 15.4
PDLIM7-207ENST00000486828 DHX15O43143 795 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 H2AFZP0C0S5 128 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 GGCXP38435 758 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 NOP2P46087 812 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 H2AFVQ71UI9 128 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 IL31RAQ8NI17 732 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 LPAR1Q92633 364 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 FAM204AQ9H8W3 233 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 DAAM1Q9Y4D1 1078 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 UBIAD1Q9Y5Z9 338 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 MYH11P35749 1972 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 EVI5O60447 810 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 KIF4AO95239 1232 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 CXCL9Q07325 125 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 TKFCQ3LXA3 575 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 CBWD6Q4V339 395 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 CBWD3Q5JTY5 395 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 CBWD5Q5RIA9 395 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 PCNX4Q63HM2 1172 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 SYCP3Q8IZU3 236 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 CAVIN3Q969G5 261 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 AGO4Q9HCK5 861 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 GDF3Q9NR23 364 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 PKD2L1Q9P0L9 805 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 DBR1Q9UK59 544 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 DNAJC12Q9UKB3 198 aa19.59■□□□□ 0.73
PDLIM7-207ENST00000486828 GOLGA6BA6NDN3 693 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 MAPTP10636 758 aaKnown RBP19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 HNRNPH2P55795 449 aaKnown RBP19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 BFSP1Q12934 665 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 ALCAMQ13740 583 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 IFT20Q8IY31 132 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 USP38Q8NB14 1042 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 TPCN2Q8NHX9 752 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 SLC30A5Q8TAD4 765 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 OLIG1Q8TAK6 271 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 PBKQ96KB5 322 aa19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 INTS2Q9H0H0 1204 aaKnown RBP19.58■□□□□ 0.72
PDLIM7-207ENST00000486828 K7ENM7 598 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 EXOC3O60645 756 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 TRIM49P0CI25 452 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 TRIM49CP0CI26 452 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 ITGB3BPQ13352 177 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 DRAP1Q14919 205 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 DNAAF5Q86Y56 855 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 FMNL3Q8IVF7 1028 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 LNX1Q8TBB1 728 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 U2AF1L4Q8WU68 220 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 LMBR1Q8WVP7 490 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 KIAA1683Q9H0B3 1180 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 MYOZ2Q9NPC6 264 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 LARSQ9P2J5 1176 aaKnown RBP19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 ZHX2Q9Y6X8 837 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 LTBP3Q9NS15 1303 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 KCNK3O14649 394 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 ALAS1P13196 640 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 NPEPPSP55786 919 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 MYL7Q01449 175 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 NNTQ13423 1086 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 RASA3Q14644 834 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 SLFN11Q7Z7L1 901 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 SAMD3Q8N6K7 520 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 GOLGA6L1Q8N7Z2 621 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 AFAP1L1Q8TED9 768 aa19.57■□□□□ 0.72
PDLIM7-207ENST00000486828 TMEM174Q8WUU8 243 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms