RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 HOXC8P31273 242 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 ADAM17P78536 824 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-229ENST00000486665 FPGSQ05932 587 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 RAD51AP2Q09MP3 1159 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 MKRN4PQ13434 485 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-229ENST00000486665 PNOCQ13519 176 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 GIT2Q14161 759 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 GRIN2CQ14957 1233 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 KLHL40Q2TBA0 621 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 GDF6Q6KF10 455 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-229ENST00000486665 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 MTHFD1LQ6UB35 978 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 DYMQ7RTS9 669 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 ELOA2Q8IYF1 753 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-229ENST00000486665 SLC43A3Q8NBI5 491 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 LMBR1Q8WVP7 490 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 DDX12PQ92771 950 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 DNAJC19Q96DA6 116 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 CCDC43Q96MW1 224 aaKnown RBP14.19□□□□□ -0.14
HDAC6-229ENST00000486665 TRIM9Q9C026 710 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 STARD7Q9NQZ5 370 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 TMEM63CQ9P1W3 806 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 COL1A2P08123 1366 aa14.19□□□□□ -0.14
HDAC6-229ENST00000486665 NRCAMQ92823 1304 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 MYH9P35579 1960 aaKnown RBP14.18□□□□□ -0.14
HDAC6-229ENST00000486665 IGKV6-21A0A0C4DH24 114 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 C17orf102A2RUQ5 167 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 RSPH10B2B2RC85 870 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 TREHO43280 583 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-229ENST00000486665 DGAT1O75907 488 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 RSPH10BP0C881 870 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 FOSL2P15408 326 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 RFC5P40937 340 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 CDK7P50613 346 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 AMPD3Q01432 767 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 TBC1D8BQ0IIM8 1120 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 DPYDQ12882 1025 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 DRP2Q13474 957 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 POSTNQ15063 836 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 SKOR2Q2VWA4 1001 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-229ENST00000486665 FAM47CQ5HY64 1035 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 NFRKBQ6P4R8 1299 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 SESTD1Q86VW0 696 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 DAW1Q8N136 415 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 LRRC71Q8N4P6 559 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 TMEM143Q96AN5 459 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 TOX2Q96NM4 488 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.18□□□□□ -0.141e-7■□□□□ 8.4
HDAC6-229ENST00000486665 GPRC5CQ9NQ84 441 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 GTF2IRD1Q9UHL9 959 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 PPME1Q9Y570 386 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 GBF1Q92538 1859 aa14.18□□□□□ -0.14
HDAC6-229ENST00000486665 SCN10AQ9Y5Y9 1956 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 A0A0U1RQG5 324 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-229ENST00000486665 MBLAC1A4D2B0 266 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-229ENST00000486665 SFI1A8K8P3 1242 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 GRXCR1A8MXD5 290 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 ARVCFO00192 962 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 KLRC4O43908 158 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 HIP1RO75146 1068 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 TIMP1P01033 207 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 KRT18P05783 430 aaKnown RBP14.17□□□□□ -0.14
HDAC6-229ENST00000486665 GUCY2CP25092 1073 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 POLGP54098 1239 aaPredicted RBP14.17□□□□□ -0.14
HDAC6-229ENST00000486665 MAPK7Q13164 816 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 EMC2Q15006 297 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 FAM102BQ5T8I3 360 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 EFCAB12Q6NXP0 572 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 CAVIN1Q6NZI2 390 aaKnown RBP14.17□□□□□ -0.14
HDAC6-229ENST00000486665 CNNM4Q6P4Q7 775 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 RUFY4Q6ZNE9 571 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 LINC01465Q8N7H1 131 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 CTAGE1Q96RT6 745 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 REEP2Q9BRK0 252 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 LRRC27Q9C0I9 530 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 NUP62CLQ9H1M0 184 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 SUGCTQ9HAC7 445 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 ATP6V0A4Q9HBG4 840 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 PCDHA2Q9Y5H9 948 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 CHD7Q9P2D1 2997 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 REV3LO60673 3130 aa14.17□□□□□ -0.14
HDAC6-229ENST00000486665 DCDC2CA8MYV0 355 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 MAGEB2O15479 319 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 GNAT1P11488 350 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 DNAJB2P25686 324 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 ARL2P36404 184 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 PBX2P40425 430 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 CLCN3P51790 818 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 PTPN11Q06124 597 aaPredicted RBP14.16□□□□□ -0.14
HDAC6-229ENST00000486665 CCDC183Q5T5S1 534 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 METTL13Q8N6R0 699 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 SLC7A3Q8WY07 619 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 TRPV6Q9H1D0 765 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 PRDM6Q9NQX0 595 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 TRMT13Q9NUP7 481 aaKnown RBP14.16□□□□□ -0.14
HDAC6-229ENST00000486665 KCND2Q9NZV8 630 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 TUBE1Q9UJT0 475 aa14.16□□□□□ -0.14
HDAC6-229ENST00000486665 PCDHA5Q9Y5H7 936 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms