RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SIT1Q9Y3P8 196 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 PCDHA2Q9Y5H9 948 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 SNX14Q9Y5W7 946 aa11.23□□□□□ -0.61
SND1-213ENST00000486037 PRR5-ARHGAP8B1AHC4 643 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 M0QZ92 97 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 SLC27A2O14975 620 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 RPS6KA5O75582 802 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 SDHBP21912 280 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 METAP2P50579 478 aaKnown RBP eCLIP11.22□□□□□ -0.611e-6■■■□□ 18.9
SND1-213ENST00000486037 ANAPC15P60006 121 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 ARHGAP8P85298 464 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 LMNB2Q03252 620 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 KRT17Q04695 432 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 DSC3Q14574 896 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 CREB3L3Q68CJ9 461 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 MFSD6Q6ZSS7 791 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 FAM228AQ86W67 206 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 HOMER1Q86YM7 354 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 SLC44A3Q8N4M1 653 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 ENAHQ8N8S7 591 aaPredicted RBP11.22□□□□□ -0.61
SND1-213ENST00000486037 DOCK8Q8NF50 2099 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 BCL7CQ8WUZ0 217 aaPredicted RBP11.22□□□□□ -0.61
SND1-213ENST00000486037 SEPT1Q8WYJ6 367 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 TMEM117Q9H0C3 514 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 ZBP1Q9H171 429 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 SH2B1Q9NRF2 756 aaPredicted RBP11.22□□□□□ -0.61
SND1-213ENST00000486037 C1orf112Q9NSG2 853 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 PKD2L1Q9P0L9 805 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 USP18Q9UMW8 372 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 SMG5Q9UPR3 1016 aaKnown RBP11.22□□□□□ -0.61
SND1-213ENST00000486037 TAF6LQ9Y6J9 622 aa11.22□□□□□ -0.61
SND1-213ENST00000486037 SMG1Q96Q15 3661 aaKnown RBP11.21□□□□□ -0.61
SND1-213ENST00000486037 PATJQ8NI35 1801 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 PPM1AP35813 382 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 WTAPQ15007 396 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 CLLU1OSQ5K130 101 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 PHLDB3Q6NSJ2 640 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 CABP7Q86V35 215 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 PJA1Q8NG27 643 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 PIGSQ96S52 555 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 MYADMQ96S97 322 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 ARHGEF3Q9NR81 526 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 IGSF9Q9P2J2 1179 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 MAD2L2Q9UI95 211 aa11.21□□□□□ -0.61
SND1-213ENST00000486037 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.21□□□□□ -0.61
SND1-213ENST00000486037 SMIM35A0A1B0GVV1 85 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 RRN3P2A6NIE6 340 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 KLRF2D3W0D1 207 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 SPTLC1O15269 473 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 STAM2O75886 525 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 SRFP11831 508 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 RABEP1Q15276 862 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 MTHFD1LQ6UB35 978 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 VPS52Q8N1B4 723 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 LRRC43Q8N309 656 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 SAMD3Q8N6K7 520 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 ESR2Q92731 530 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 IPO9Q96P70 1041 aaKnown RBP11.2□□□□□ -0.62
SND1-213ENST00000486037 VN1R3Q9BXE9 311 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 SMARCAD1Q9H4L7 1026 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 ELAC1Q9H777 363 aaKnown RBP11.2□□□□□ -0.62
SND1-213ENST00000486037 SFXN1Q9H9B4 322 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 MTF2Q9Y483 593 aaPredicted RBP11.2□□□□□ -0.62
SND1-213ENST00000486037 CEP295Q9C0D2 2601 aa11.2□□□□□ -0.62
SND1-213ENST00000486037 CNOT1A5YKK6 2376 aaKnown RBP11.19□□□□□ -0.62
SND1-213ENST00000486037 LOC400499M0QZD8 3231 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 SETXQ7Z333 2677 aaKnown RBP11.19□□□□□ -0.62
SND1-213ENST00000486037 ZMYM6O95789 1325 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 B4E1Z4 1266 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 CYTH3O43739 400 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 CD2BP2O95400 341 aaKnown RBP11.19□□□□□ -0.62
SND1-213ENST00000486037 CYP21A2P08686 494 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 ITGB5P18084 799 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 BCAR1P56945 870 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 CSTF1Q05048 431 aaKnown RBP11.19□□□□□ -0.62
SND1-213ENST00000486037 PCNX4Q63HM2 1172 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 USP17L6PQ6QN14 398 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 TSSK4Q6SA08 328 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 KIAA0319LQ8IZA0 1049 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 GPR161Q8N6U8 529 aaKnown RBP11.19□□□□□ -0.62
SND1-213ENST00000486037 ZBTB44Q8NCP5 570 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 ZSCAN10Q96SZ4 725 aaPredicted RBP11.19□□□□□ -0.62
SND1-213ENST00000486037 OSMRQ99650 979 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 EPC1Q9H2F5 836 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 MIA3Q5JRA6 1907 aa11.19□□□□□ -0.62
SND1-213ENST00000486037 SLC30A4O14863 429 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 LILRB5O75023 590 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 RPLP2P05387 115 aaKnown RBP11.18□□□□□ -0.62
SND1-213ENST00000486037 MYBP10242 640 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 CTSAP10619 480 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 PMLP29590 882 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 GBP2P32456 591 aaPredicted RBP11.18□□□□□ -0.62
SND1-213ENST00000486037 CLCN4P51793 760 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 SPEM2Q0P670 501 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 PTPN14Q15678 1187 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 LPAL2Q16609 132 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 KIZQ2M2Z5 673 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 ZNF528Q3MIS6 628 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 ADCK5Q3MIX3 580 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms