RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 LCHNA4D1U4 455 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 EPOPA6NHQ4 379 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 BTBD18B2RXH4 712 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 GTPBP6O43824 516 aaPredicted RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 SLC37A4O43826 429 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 CCNT1O60563 726 aaKnown RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 MAFO75444 373 aaPredicted RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 RPS6KA5O75582 802 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 DGKIO75912 1065 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 LYPLA2O95372 231 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 LINC00271P0C7V0 271 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 XRCC6P12956 609 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS50-218ENST00000485994 CD52P31358 61 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 QARSP47897 775 aaKnown RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 SPIRE1Q08AE8 756 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 ST3GAL1Q11201 340 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 NR5A1Q13285 461 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 GRB10Q13322 594 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 TRIM29Q14134 588 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 RABEP1Q15276 862 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 NAALADL2Q58DX5 795 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 EARS2Q5JPH6 523 aaKnown RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 SLC24A5Q71RS6 500 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 NPAS4Q8IUM7 802 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 DIS3L2Q8IYB7 885 aaKnown RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 FBXO18Q8NFZ0 1043 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 SYMPKQ92797 1274 aaKnown RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 ZBTB10Q96DT7 871 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 MTMR9Q96QG7 549 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 HSD17B14Q9BPX1 270 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 FAM49AQ9H0Q0 323 aaPredicted RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 FOXP1Q9H334 677 aaPredicted RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 ELAC1Q9H777 363 aaKnown RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 ERVK-5Q9HDB9 667 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 C1orf112Q9NSG2 853 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 VAV3Q9UKW4 847 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 NOC2LQ9Y3T9 749 aaKnown RBP7.87□□□□□ -1.15
VPS50-218ENST00000485994 GTF3C3Q9Y5Q9 886 aa7.87□□□□□ -1.15
VPS50-218ENST00000485994 RALGAPA2Q2PPJ7 1873 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 C9IYK1 514 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 H3BNC9 293 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 EML1O00423 815 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 ASAP2O43150 1006 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 GAS2O43903 313 aaKnown RBP7.86□□□□□ -1.15
VPS50-218ENST00000485994 JAK2O60674 1132 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 SLITRK3O94933 977 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 IGFBP4P22692 258 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 EIF4BP23588 611 aaKnown RBP7.86□□□□□ -1.15
VPS50-218ENST00000485994 U2AF2P26368 475 aaKnown RBP eCLIP7.86□□□□□ -1.156e-6■■■■□ 22.5
VPS50-218ENST00000485994 BMPR1AP36894 532 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 TRAPPC10P48553 1259 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 SARSP49591 514 aaKnown RBP7.86□□□□□ -1.15
VPS50-218ENST00000485994 MCM2P49736 904 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 DNM2P50570 870 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 PRKCEQ02156 737 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 POU5F1BQ06416 359 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 TBC1D8BQ0IIM8 1120 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 PAK2Q13177 524 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 DSC3Q14574 896 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 SAFBQ15424 915 aaKnown RBP eCLIP7.86□□□□□ -1.15
VPS50-218ENST00000485994 UGCGQ16739 394 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 EPC2Q52LR7 807 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 ANO5Q75V66 913 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 OTUD6AQ7L8S5 288 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 TMCO2Q7Z6W1 182 aaPredicted RBP7.86□□□□□ -1.15
VPS50-218ENST00000485994 TMEM192Q8IY95 271 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 CMTR2Q8IYT2 770 aaKnown RBP7.86□□□□□ -1.15
VPS50-218ENST00000485994 ARNTL2Q8WYA1 636 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 RSPH1Q8WYR4 309 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 P2RX5Q93086 422 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 GJA10Q969M2 543 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 UIMC1Q96RL1 719 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 MAP7D2Q96T17 732 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 YME1L1Q96TA2 773 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 PLVAPQ9BX97 442 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 INO80BQ9C086 356 aaPredicted RBP7.86□□□□□ -1.15
VPS50-218ENST00000485994 TMX1Q9H3N1 280 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 ZSWIM4Q9H7M6 989 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 CHST12Q9NRB3 414 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 DAXXQ9UER7 740 aaPredicted RBP7.86□□□□□ -1.15
VPS50-218ENST00000485994 PCDHA12Q9UN75 941 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 ST3GAL5Q9UNP4 418 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 COG5Q9UP83 839 aa7.86□□□□□ -1.15
VPS50-218ENST00000485994 NLRC5Q86WI3 1866 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.85□□□□□ -1.15
VPS50-218ENST00000485994 DDX11L8A8MPP1 907 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 RFXAPO00287 272 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 UPP2O95045 317 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 EOMESO95936 686 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 DARSP14868 501 aaKnown RBP7.85□□□□□ -1.15
VPS50-218ENST00000485994 COL9A1P20849 921 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 MUTP22033 750 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 GPC3P51654 580 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 NLRP11P59045 1033 aaKnown RBP7.85□□□□□ -1.15
VPS50-218ENST00000485994 MRPS5P82675 430 aaKnown RBP7.85□□□□□ -1.15
VPS50-218ENST00000485994 KIZQ2M2Z5 673 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 PPP1R15BQ5SWA1 713 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 ZNF410Q86VK4 478 aa7.85□□□□□ -1.15
VPS50-218ENST00000485994 FAM228AQ86W67 206 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms