RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 TIPINQ9BVW5 301 aa17.11■□□□□ 0.33
HDHD3-203ENST00000485934 BHMT2Q9H2M3 363 aa17.11■□□□□ 0.33
HDHD3-203ENST00000485934 FBXO2Q9UK22 296 aaPredicted RBP17.11■□□□□ 0.33
HDHD3-203ENST00000485934 COL4A3BPQ9Y5P4 624 aa17.11■□□□□ 0.33
HDHD3-203ENST00000485934 PP2D1A8MPX8 630 aa17.1■□□□□ 0.33
HDHD3-203ENST00000485934 AMHP03971 560 aa17.1■□□□□ 0.33
HDHD3-203ENST00000485934 NCBP1Q09161 790 aaKnown RBP17.1■□□□□ 0.33
HDHD3-203ENST00000485934 PKP1Q13835 747 aa17.1■□□□□ 0.33
HDHD3-203ENST00000485934 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
HDHD3-203ENST00000485934 MMTAG2Q9BU76 263 aaKnown RBP17.1■□□□□ 0.33
HDHD3-203ENST00000485934 SCAND2PQ9GZW5 306 aaPredicted RBP17.1■□□□□ 0.33
HDHD3-203ENST00000485934 CSRNP2Q9H175 543 aa17.1■□□□□ 0.33
HDHD3-203ENST00000485934 ADAMTS10Q9H324 1103 aa17.1■□□□□ 0.33
HDHD3-203ENST00000485934 USO1O60763 962 aaKnown RBP17.09■□□□□ 0.33
HDHD3-203ENST00000485934 CUTAO60888 179 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 DARSP14868 501 aaKnown RBP17.09■□□□□ 0.33
HDHD3-203ENST00000485934 ATP2A2P16615 1042 aaKnown RBP17.09■□□□□ 0.33
HDHD3-203ENST00000485934 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
HDHD3-203ENST00000485934 SMAD3P84022 425 aaKnown RBP17.09■□□□□ 0.33
HDHD3-203ENST00000485934 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
HDHD3-203ENST00000485934 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
HDHD3-203ENST00000485934 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 TMEM143Q96AN5 459 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 OSMRQ99650 979 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
HDHD3-203ENST00000485934 PADI3Q9ULW8 664 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 KAT6AQ92794 2004 aa17.09■□□□□ 0.33
HDHD3-203ENST00000485934 MYH9P35579 1960 aaKnown RBP17.08■□□□□ 0.33
HDHD3-203ENST00000485934 ZSCAN20P17040 1043 aaPredicted RBP17.08■□□□□ 0.32
HDHD3-203ENST00000485934 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
HDHD3-203ENST00000485934 PHKA2P46019 1235 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 ME1P48163 572 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 DNM1Q05193 864 aaKnown RBP17.08■□□□□ 0.32
HDHD3-203ENST00000485934 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 RAB30Q15771 203 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 GPR153Q6NV75 609 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 VWCEQ96DN2 955 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 IFT74Q96LB3 600 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 DRC1Q96MC2 740 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 NLRP4Q96MN2 994 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 PYM1Q9BRP8 204 aaKnown RBP17.08■□□□□ 0.32
HDHD3-203ENST00000485934 C17orf75Q9HAS0 396 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 CHST12Q9NRB3 414 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 MSRAQ9UJ68 235 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 RCOR1Q9UKL0 485 aa17.08■□□□□ 0.32
HDHD3-203ENST00000485934 E9PMD0 336 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 SRGAP2CP0DJJ0 459 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 CD52P31358 61 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 DDIT3P35638 169 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 ARL2P36404 184 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 DRP2Q13474 957 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 ECM1Q16610 540 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 FOXD4L6Q3SYB3 417 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-203ENST00000485934 TMEM119Q4V9L6 283 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 FAM102BQ5T8I3 360 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 RRAGBQ5VZM2 374 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 FOXD4L3Q6VB84 417 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-203ENST00000485934 SYT2Q8N9I0 419 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-203ENST00000485934 RNF149Q8NC42 400 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 SYMPKQ92797 1274 aaKnown RBP17.07■□□□□ 0.32
HDHD3-203ENST00000485934 SPATA32Q96LK8 384 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 ZBED2Q9BTP6 218 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 NFKBIZQ9BYH8 718 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 AGO3Q9H9G7 860 aaKnown RBP17.07■□□□□ 0.32
HDHD3-203ENST00000485934 XPNPEP1Q9NQW7 623 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 C1orf112Q9NSG2 853 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 BMP2KQ9NSY1 1161 aaPredicted RBP17.07■□□□□ 0.32
HDHD3-203ENST00000485934 DACT1Q9NYF0 836 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 STK17AQ9UEE5 414 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 ST3GAL5Q9UNP4 418 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 ZDHHC9Q9Y397 364 aa17.07■□□□□ 0.32
HDHD3-203ENST00000485934 NOC2LQ9Y3T9 749 aaKnown RBP17.07■□□□□ 0.32
HDHD3-203ENST00000485934 PHLPP2Q6ZVD8 1323 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 LTBP2Q14767 1821 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 A0A087WWV3 80 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 A0A087WZ62 844 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 DENND3A2RUS2 1198 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
HDHD3-203ENST00000485934 PLA2G4BP0C869 781 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 WDR5P61964 334 aaKnown RBP17.06■□□□□ 0.32
HDHD3-203ENST00000485934 GRB10Q13322 594 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 PNMA5Q96PV4 448 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 PPP1R16BQ96T49 567 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 FDXACB1Q9BRP7 624 aaPredicted RBP17.06■□□□□ 0.32
HDHD3-203ENST00000485934 LRRC27Q9C0I9 530 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 POLR3FQ9H1D9 316 aaPredicted RBP17.06■□□□□ 0.32
HDHD3-203ENST00000485934 C2orf40Q9H1Z8 148 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 CDHR5Q9HBB8 845 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 ERVK-5Q9HDB9 667 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 CXXC1Q9P0U4 656 aaPredicted RBP17.06■□□□□ 0.32
HDHD3-203ENST00000485934 PCDH10Q9P2E7 1040 aa17.06■□□□□ 0.32
HDHD3-203ENST00000485934 ENPP3O14638 875 aa17.05■□□□□ 0.32
HDHD3-203ENST00000485934 STAG3L1P0CL83 205 aa17.05■□□□□ 0.32
HDHD3-203ENST00000485934 SKIP12755 728 aa17.05■□□□□ 0.32
HDHD3-203ENST00000485934 SCP2P22307 547 aa17.05■□□□□ 0.32
HDHD3-203ENST00000485934 GUCY2CP25092 1073 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms