RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ATL3Q6DD88 541 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 TSHZ1Q6ZSZ6 1077 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 USP49Q70CQ1 688 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 PSPC1Q8WXF1 523 aaKnown RBP13.18□□□□□ -0.3
HPS4-214ENST00000485842 HERVK_113Q902F9 699 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 SEPT8Q92599 483 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 SYMPKQ92797 1274 aaKnown RBP13.18□□□□□ -0.3
HPS4-214ENST00000485842 EPSTI1Q96J88 318 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 POLR3FQ9H1D9 316 aaPredicted RBP13.18□□□□□ -0.3
HPS4-214ENST00000485842 CFAP45Q9UL16 551 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 ATP6V1DQ9Y5K8 247 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
HPS4-214ENST00000485842 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 GPR32O75388 356 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 PLCG1P19174 1290 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 DDIT3P35638 169 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 ME1P48163 572 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
HPS4-214ENST00000485842 KRT85P78386 507 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 PAK2Q13177 524 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 IKBKEQ14164 716 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 TMEM119Q4V9L6 283 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 PLEKHG4Q58EX7 1191 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 HABP4Q5JVS0 413 aaKnown RBP13.17□□□□□ -0.3
HPS4-214ENST00000485842 HYIQ5T013 277 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 KSR1Q8IVT5 923 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 TMEM40Q8WWA1 233 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 ADAMTS10Q9H324 1103 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 AGO3Q9H9G7 860 aaKnown RBP13.17□□□□□ -0.3
HPS4-214ENST00000485842 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
HPS4-214ENST00000485842 SLC4A7Q9Y6M7 1214 aa13.17□□□□□ -0.3
HPS4-214ENST00000485842 MORC2Q9Y6X9 1032 aaPredicted RBP13.17□□□□□ -0.3
HPS4-214ENST00000485842 TCHHQ07283 1943 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 A0A087WZ62 844 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 SLC26A4O43511 780 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 CUTAO60888 179 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 PPP6R2O75170 966 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 RPS6KA5O75582 802 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 NFX1Q12986 1120 aaKnown RBP13.16□□□□□ -0.3
HPS4-214ENST00000485842 FAM102BQ5T8I3 360 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 ZNF410Q86VK4 478 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
HPS4-214ENST00000485842 APBB2Q92870 758 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 SPATA32Q96LK8 384 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 FDXACB1Q9BRP7 624 aaPredicted RBP13.16□□□□□ -0.3
HPS4-214ENST00000485842 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
HPS4-214ENST00000485842 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 CCDC39Q9UFE4 941 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
HPS4-214ENST00000485842 PTPRSQ13332 1948 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 ABHD14A-ACY1A0A1B0GW23 586 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 CSDE1O75534 798 aaKnown RBP13.15□□□□□ -0.3
HPS4-214ENST00000485842 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 SRGAP2CP0DJJ0 459 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 DARSP14868 501 aaKnown RBP13.15□□□□□ -0.3
HPS4-214ENST00000485842 CYP11B2P19099 503 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 FGFR4P22455 802 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
HPS4-214ENST00000485842 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
HPS4-214ENST00000485842 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
HPS4-214ENST00000485842 FAM228AQ86W67 206 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 RNF149Q8NC42 400 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 LRRC15Q8TF66 581 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 RUSC1Q9BVN2 902 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 POLD4Q9HCU8 107 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
HPS4-214ENST00000485842 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 EFCAB14O75071 495 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
HPS4-214ENST00000485842 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
HPS4-214ENST00000485842 EIF4BP23588 611 aaKnown RBP13.14□□□□□ -0.31
HPS4-214ENST00000485842 ARL2P36404 184 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 PHKA2P46019 1235 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 DEFB103AP81534 67 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 CDC42EP1Q00587 391 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 RAD51AP2Q09MP3 1159 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 CAPSQ13938 189 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 TFDP1Q14186 410 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
HPS4-214ENST00000485842 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 ODR4Q5SWX8 454 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 RINT1Q6NUQ1 792 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 GPBP1Q86WP2 473 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 PDILTQ8N807 584 aa13.14□□□□□ -0.31
HPS4-214ENST00000485842 LEO1Q8WVC0 666 aaPredicted RBP13.14□□□□□ -0.31
HPS4-214ENST00000485842 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms