RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 CCDC175P0C221 793 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 XRCC6P12956 609 aaKnown RBP eCLIP4.6□□□□□ -1.672e-7■■□□□ 12.4
PRPF38B-205ENST00000485810 NAT1P18440 290 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 KIF5BP33176 963 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 TSPAN7P41732 249 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 CD151P48509 253 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 SARSP49591 514 aaKnown RBP4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 GPSM2P81274 684 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 IFT88Q13099 833 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 BIRC3Q13489 604 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 PICALMQ13492 652 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 ZYXQ15942 572 aaKnown RBP4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 BBS9Q3SYG4 887 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 CFAP161Q6P656 301 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 CPLX2Q6PUV4 134 aaKnown RBP4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 CCDC81Q6ZN84 652 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 C11orf74Q86VG3 221 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 RASSF3Q86WH2 238 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 JAMLQ86YT9 394 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 IGDCC3Q8IVU1 814 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 RPAP2Q8IXW5 612 aaPredicted RBP4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 ZDHHC14Q8IZN3 488 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 ZNF655Q8N720 491 aaPredicted RBP4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 DAGLBQ8NCG7 672 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 PGBD4Q96DM1 585 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 MAP6Q96JE9 813 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 PHACTR3Q96KR7 559 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 DCTPP1Q9H773 170 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 STK26Q9P289 416 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 MCM8Q9UJA3 840 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 PRDM4Q9UKN5 801 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 R3HCC1Q9Y3T6 440 aaKnown RBP4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 OVOS2A0A0J9YW53 1432 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 RGS12O14924 1447 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 OVOS2Q6IE36 1432 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 SSH2Q76I76 1423 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 ATP10DQ9P241 1426 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 AKAP12Q02952 1782 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 PTPRCP08575 1304 aa4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 SOS1Q07889 1333 aaPredicted RBP4.6□□□□□ -1.67
PRPF38B-205ENST00000485810 DIP2BQ9P265 1576 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 RTL1A6NKG5 1358 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 ARHGEF10O15013 1369 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 IQCA1LA6NCM1 817 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 ERICH4A6NGS2 130 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 RASSF10A6NK89 507 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 MEIS3P2A8K0S8 358 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 SMTNL1A8MU46 457 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 TNFRSF10CO14798 259 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 SIGLEC6O43699 453 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 TP53P04637 393 aaPredicted RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 CELA3BP08861 270 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 SRGNP10124 158 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 SLC5A1P13866 664 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 HALP42357 657 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 CTSKP43235 329 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 PCBP3P57721 371 aaKnown RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 SNX16P57768 344 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 AUHQ13825 339 aaKnown RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 SMC1AQ14683 1233 aaKnown RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 E2F5Q15329 346 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 LRRFIP1Q32MZ4 808 aaKnown RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 TWISTNBQ3B726 338 aaPredicted RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 CT47A1Q5JQC4 288 aaPredicted RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 RNF111Q6ZNA4 994 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 CEP128Q6ZU80 1094 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 ANKS3Q6ZW76 656 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 MAATS1Q7Z4T9 603 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 SNX32Q86XE0 403 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 FAM129CQ86XR2 697 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 CLASRPQ8N2M8 674 aaKnown RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 CENPTQ96BT3 561 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 GPRASP2Q96D09 838 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 VMP1Q96GC9 406 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 GBP4Q96PP9 640 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 FERD3LQ96RJ6 166 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 MAP3K14Q99558 947 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 POLR3CQ9BUI4 534 aaPredicted RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 XPO4Q9C0E2 1151 aaKnown RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 ADAM7Q9H2U9 754 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 CRTAC1Q9NQ79 661 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 SH3GLB2Q9NR46 395 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 CHST7Q9NS84 486 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 KLHL14Q9P2G3 628 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 USP25Q9UHP3 1055 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 ZNRF3Q9ULT6 936 aa4.59□□□□□ -1.67
PRPF38B-205ENST00000485810 MAP2P11137 1827 aaKnown RBP4.59□□□□□ -1.68
PRPF38B-205ENST00000485810 RGPD1P0DJD0 1748 aa4.59□□□□□ -1.68
PRPF38B-205ENST00000485810 KDRP35968 1356 aa4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 TOPAZ1Q8N9V7 1692 aa4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 CCDC85CA6NKD9 419 aa4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 CPLX1O14810 134 aa4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 IDEP14735 1019 aa4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 GJA8P48165 433 aa4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 SH3BGRP55822 239 aaPredicted RBP4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 ERVFRD-1P60508 538 aa4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 ZBED6P86452 979 aa4.58□□□□□ -1.68
PRPF38B-205ENST00000485810 PURAQ00577 322 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms