RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 IER5Q5VY09 327 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 CCDC73Q6ZRK6 1079 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 C1orf186Q6ZWK4 172 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 NME8Q8N427 588 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 FSIP1Q8NA03 581 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 PRPF31Q8WWY3 499 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 DHX58Q96C10 678 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 MAP7D2Q96T17 732 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 GOLPH3LQ9H4A5 285 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 FAM13BQ9NYF5 915 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 GINS2Q9Y248 185 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 TRPV2Q9Y5S1 764 aa17.21■□□□□ 0.35
RPUSD3-217ENST00000485705 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 A0A1W2PQ27 194 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 A0A1W2PQ64 194 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 A0A1W2PQD8 194 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 POLR2DO15514 142 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 NBNO60934 754 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 ARL2P36404 184 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 MAGEA10P43363 369 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 DNM2P50570 870 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 EPHB4P54760 987 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 RAD51AP2Q09MP3 1159 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 ARSHQ5FYA8 562 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 FAM102BQ5T8I3 360 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 GPBP1Q86WP2 473 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 RHPN2Q8IUC4 686 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 EXOC8Q8IYI6 725 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 ASAP3Q8TDY4 903 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 LBHD1Q9BQE6 289 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 CELF4Q9BZC1 486 aaKnown RBP17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 ADAMTS10Q9H324 1103 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 KCNH3Q9ULD8 1083 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 HPSEQ9Y251 543 aa17.2■□□□□ 0.34
RPUSD3-217ENST00000485705 FAM237AA0A1B0GTK4 181 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 GAS2O43903 313 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 GADD45BO75293 160 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 RPLP2P05387 115 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 ACRP10323 421 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 GLRA2P23416 452 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 GPC3P51654 580 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 NDUFA8P51970 172 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 DEFB128Q7Z7B8 93 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 DAW1Q8N136 415 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 TMEM199Q8N511 208 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 MCPH1Q8NEM0 835 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 TMEM40Q8WWA1 233 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 TCP11Q8WWU5 503 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 PSPC1Q8WXF1 523 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 BSNDQ8WZ55 320 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 STAMQ92783 540 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 OSMRQ99650 979 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 COL4A3BPQ9Y5P4 624 aa17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 RANBP2P49792 3224 aaKnown RBP17.19■□□□□ 0.34
RPUSD3-217ENST00000485705 A0A087WZ62 844 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 SFI1A8K8P3 1242 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 M0QZ92 97 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 HIP1RO75146 1068 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 SRGAP2CP0DJJ0 459 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 GHRP10912 638 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 FPGSQ05932 587 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 LAMTOR4Q0VGL1 99 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 MAPK7Q13164 816 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 LPIN1Q14693 890 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 TCTN1Q2MV58 587 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 FBXO47Q5MNV8 452 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 C16orf59Q7L2K0 433 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 TMEM87AQ8NBN3 555 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 MRPS27Q92552 414 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 NLRP4Q96MN2 994 aa17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 FDXACB1Q9BRP7 624 aaPredicted RBP17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 AGO3Q9H9G7 860 aaKnown RBP17.18■□□□□ 0.34
RPUSD3-217ENST00000485705 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 MYMKA6NI61 221 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 CSDE1O75534 798 aaKnown RBP17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 GUCY2CP25092 1073 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 CRYBB1P53674 252 aaPredicted RBP17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 SV2BQ7L1I2 683 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 IQUBQ8NA54 791 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 NLRP7Q8WX94 980 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 GDF15Q99988 308 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 IL23AQ9NPF7 189 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 SERTAD1Q9UHV2 236 aa17.17■□□□□ 0.34
RPUSD3-217ENST00000485705 ACTN4O43707 911 aaKnown RBP17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 CXCL10P02778 98 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 SYKP43405 635 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 PPIGQ13427 754 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 CAPSQ13938 189 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 GIT2Q14161 759 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 DYMQ7RTS9 669 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 RNF149Q8NC42 400 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 SCLT1Q96NL6 688 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 REEP2Q9BRK0 252 aa17.16■□□□□ 0.34
RPUSD3-217ENST00000485705 IFT122Q9HBG6 1241 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms