RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 PIK3CDO00329 1044 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 CASC1Q6TDU7 716 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 CABP7Q86V35 215 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 FEZF2Q8TBJ5 459 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 TRAPPC12Q8WVT3 735 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 CUL5Q93034 780 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 MAP3K14Q99558 947 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 LSG1Q9H089 658 aaKnown RBP13.91□□□□□ -0.18
SSR4-210ENST00000485612 SEC63Q9UGP8 760 aaKnown RBP13.91□□□□□ -0.18
SSR4-210ENST00000485612 CA14Q9ULX7 337 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 SIT1Q9Y3P8 196 aa13.91□□□□□ -0.18
SSR4-210ENST00000485612 SLC27A2O14975 620 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 GPR182O15218 404 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 HOXA2O43364 376 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 ITGB5P18084 799 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 KIF5BP33176 963 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 GPR149Q86SP6 731 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 SLC39A11Q8N1S5 342 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 CDHR5Q9HBB8 845 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 DLGAP2Q9P1A6 1054 aa13.9□□□□□ -0.18
SSR4-210ENST00000485612 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.89□□□□□ -0.19
SSR4-210ENST00000485612 CCDC69A6NI79 296 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 SMARCA1P28370 1054 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 MCM5P33992 734 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 LMNB2Q03252 620 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 PLCB4Q15147 1175 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 NONOQ15233 471 aaKnown RBP eCLIP13.89□□□□□ -0.19
SSR4-210ENST00000485612 MTHFD1LQ6UB35 978 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 ABI1Q8IZP0 508 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 SLC22A17Q8WUG5 538 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 TMEM40Q8WWA1 233 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 RSAD2Q8WXG1 361 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 SECISBP2LQ93073 1101 aaKnown RBP13.89□□□□□ -0.19
SSR4-210ENST00000485612 GPRASP2Q96D09 838 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 CDHR1Q96JP9 859 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 PCYT2Q99447 389 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 AZI2Q9H6S1 392 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 SFXN1Q9H9B4 322 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 UBIAD1Q9Y5Z9 338 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 OTOGLQ3ZCN5 2332 aa13.89□□□□□ -0.19
SSR4-210ENST00000485612 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 GIT2Q14161 759 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 LETM2Q2VYF4 491 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 CREB3L3Q68CJ9 461 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 PHLDB3Q6NSJ2 640 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 TMTC3Q6ZXV5 915 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 VPS52Q8N1B4 723 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 AUTS2Q8WXX7 1259 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 PGBD1Q96JS3 809 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 TMEM87BQ96K49 555 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 LZTS2Q9BRK4 669 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 PSTPIP2Q9H939 334 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 CNTNAP5Q8WYK1 1306 aa13.88□□□□□ -0.19
SSR4-210ENST00000485612 BAHCC1Q9P281 2608 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 POTEMA6NI47 508 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 NT5C1B-RDH14C9J2C7 533 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 ALDH7A1P49419 539 aaKnown RBP13.87□□□□□ -0.19
SSR4-210ENST00000485612 GNAQP50148 359 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 METAP2P50579 478 aaKnown RBP eCLIP13.87□□□□□ -0.193e-6■■■■□ 21.8
SSR4-210ENST00000485612 MTMR1Q13613 665 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 TYW1BQ6NUM6 668 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 POTEGQ6S5H5 508 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 HEATR3Q7Z4Q2 680 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 MAML2Q8IZL2 1156 aaPredicted RBP13.87□□□□□ -0.19
SSR4-210ENST00000485612 SLC44A3Q8N4M1 653 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 ZBP1Q9H171 429 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 PCDHA6Q9UN73 950 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 PCDHA8Q9Y5H6 950 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 IRAK3Q9Y616 596 aa13.87□□□□□ -0.19
SSR4-210ENST00000485612 SPTLC1O15269 473 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 SRFP11831 508 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 KLRC1P26715 233 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 LIFRP42702 1097 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 DSC3Q14574 896 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 NECTIN1Q15223 517 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 ZNF528Q3MIS6 628 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 WWC2Q6AWC2 1192 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 FAM228AQ86W67 206 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 PPFIBP1Q86W92 1011 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 KIAA0319LQ8IZA0 1049 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 GPR152Q8TDT2 470 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 ATRIPQ8WXE1 791 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 TCEANC2Q96MN5 208 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 JADE2Q9NQC1 790 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 USP18Q9UMW8 372 aa13.86□□□□□ -0.19
SSR4-210ENST00000485612 FANCMQ8IYD8 2048 aa13.85□□□□□ -0.19
SSR4-210ENST00000485612 SPDYE3A6NKU9 549 aa13.85□□□□□ -0.19
SSR4-210ENST00000485612 N4BP1O75113 896 aaKnown RBP13.85□□□□□ -0.19
SSR4-210ENST00000485612 CTSAP10619 480 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms