RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 TGFB2P61812 414 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 LRSAM1Q6UWE0 723 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 SGMS1Q86VZ5 419 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 HOMER1Q86YM7 354 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 PHYKPLQ8IUZ5 450 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 ZNF503Q96F45 646 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 WDR92Q96MX6 357 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 OSBPL6Q9BZF3 934 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 CSRNP2Q9H175 543 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 POLR3BQ9NW08 1133 aaPredicted RBP5.14□□□□□ -1.59
VPS50-217ENST00000485140 TMEM260Q9NX78 707 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 WDR33Q9C0J8 1336 aaKnown RBP5.14□□□□□ -1.59
VPS50-217ENST00000485140 PTPDC1A2A3K4 754 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 GOLGA8BA8MQT2 603 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 MATN2O00339 956 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 MTSS1O43312 755 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 GAS7O60861 476 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 IPO13O94829 963 aaKnown RBP5.13□□□□□ -1.59
VPS50-217ENST00000485140 SMAD3P84022 425 aaKnown RBP5.13□□□□□ -1.59
VPS50-217ENST00000485140 SLC6A3Q01959 620 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 RIN1Q13671 783 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 CFAP100Q494V2 611 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 Q6ZSN1 163 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 FGD2Q7Z6J4 655 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 C1orf210Q8IVY1 113 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 AHI1Q8N157 1196 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 LILRB2Q8N423 598 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 C7orf31Q8N865 590 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 KIAA1958Q8N8K9 716 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 OR14K1Q8NGZ2 314 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 ERCC4Q92889 916 aaPredicted RBP5.13□□□□□ -1.59
VPS50-217ENST00000485140 MIEF2Q96C03 454 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 FOXRED1Q96CU9 486 aaPredicted RBP5.13□□□□□ -1.59
VPS50-217ENST00000485140 MRIQ9BWK5 157 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 SLITRK6Q9H5Y7 841 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 C14orf93Q9H972 538 aaKnown RBP5.13□□□□□ -1.59
VPS50-217ENST00000485140 SPO11Q9Y5K1 396 aa5.13□□□□□ -1.59
VPS50-217ENST00000485140 RASSF10A6NK89 507 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 CAPN14A8MX76 684 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 CBX4O00257 560 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 SUV39H1O43463 412 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 GLRX3O76003 335 aaKnown RBP5.12□□□□□ -1.59
VPS50-217ENST00000485140 KRT37O76014 449 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 FSBPO95073 299 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 ZNF202O95125 648 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 RAPGEF3O95398 923 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 MAKP20794 623 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 CD40P25942 277 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 ADCY7P51828 1080 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 LRRC32Q14392 662 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 BMS1Q14692 1282 aaKnown RBP5.12□□□□□ -1.59
VPS50-217ENST00000485140 LSM12Q3MHD2 195 aaKnown RBP5.12□□□□□ -1.59
VPS50-217ENST00000485140 CCDC178Q5BJE1 867 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 GSPT2Q8IYD1 628 aaKnown RBP5.12□□□□□ -1.59
VPS50-217ENST00000485140 RSAD2Q8WXG1 361 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 DYDC2Q96IM9 177 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 C16orf92Q96LL3 132 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 TUBGCP5Q96RT8 1024 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 DNAJC2Q99543 621 aaKnown RBP5.12□□□□□ -1.59
VPS50-217ENST00000485140 WNT8AQ9H1J5 351 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 PCED1AQ9H1Q7 454 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 ZSWIM4Q9H7M6 989 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 TLR9Q9NR96 1032 aa5.12□□□□□ -1.59
VPS50-217ENST00000485140 NRP2O60462 931 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 ADH4P08319 380 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 VSIG10L2P0DP72 767 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 STAT5BP51692 787 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 KRTAP1-1Q07627 177 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 FOXL1Q12952 345 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 CRHR2Q13324 411 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 TCIRG1Q13488 830 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 TUBA3CQ13748 450 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 TBR1Q16650 682 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 GPR158Q5T848 1215 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 PIK3R6Q5UE93 754 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 PRAMEF9Q5VWM5 478 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 KRT40Q6A162 431 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 ABHD17CQ6PCB6 329 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 TUBA3EQ6PEY2 450 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 TMPRSS6Q8IU80 811 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 GPR135Q8IZ08 494 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 PPM1KQ8N3J5 372 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 SH3TC2Q8TF17 1288 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 HIST1H2AHQ96KK5 128 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 PRRX2Q99811 253 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 HIST1H2AJQ99878 128 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 TCF25Q9BQ70 676 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 HAPLN2Q9GZV7 340 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 IFT57Q9NWB7 429 aa5.11□□□□□ -1.59
VPS50-217ENST00000485140 TNPO3Q9Y5L0 923 aaKnown RBP5.11□□□□□ -1.59
VPS50-217ENST00000485140 ST20-MTHFSA0A0A6YYL1 179 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 GOLGA6L6A8MZA4 724 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 TRAF5O00463 557 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 MFAP3LO75121 409 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 POU3F2P20265 443 aaPredicted RBP5.1□□□□□ -1.59
VPS50-217ENST00000485140 GPR15P49685 360 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 ADAM15Q13444 863 aa5.1□□□□□ -1.59
VPS50-217ENST00000485140 CNGB1Q14028 1251 aaPredicted RBP5.1□□□□□ -1.59
VPS50-217ENST00000485140 SART3Q15020 963 aaKnown RBP5.1□□□□□ -1.59
VPS50-217ENST00000485140 GJC2Q5T442 439 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms