RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 CENPQQ7L2Z9 268 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-227ENST00000485102 ECHDC2Q86YB7 292 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 RASEFQ8IZ41 740 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 REXO1Q8N1G1 1221 aaKnown RBP14.74□□□□□ -0.05
HDAC6-227ENST00000485102 LRRC43Q8N309 656 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 FBXL16Q8N461 479 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 LENG9Q96B70 501 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 ZNF558Q96NG5 402 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 MAP7D2Q96T17 732 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 TCF25Q9BQ70 676 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 C6orf50Q9HD87 102 aa14.74□□□□□ -0.05
HDAC6-227ENST00000485102 NID2Q14112 1375 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 KLF18A0A0U1RQI7 1052 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 CARNS1A5YM72 827 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 HIDE1A8MVS5 230 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 WDR64B1ANS9 1081 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 PRPF3O43395 683 aaKnown RBP14.73□□□□□ -0.05
HDAC6-227ENST00000485102 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
HDAC6-227ENST00000485102 TECP42680 631 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 CDC42EP1Q00587 391 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 ADCK5Q3MIX3 580 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 EFCAB12Q6NXP0 572 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 ZNF598Q86UK7 904 aaKnown RBP14.73□□□□□ -0.05
HDAC6-227ENST00000485102 MRPL43Q8N983 215 aaKnown RBP14.73□□□□□ -0.05
HDAC6-227ENST00000485102 CASP10Q92851 521 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 KCNB2Q92953 911 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 TCEANC2Q96MN5 208 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 TRAIPQ9BWF2 469 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 NRBP2Q9NSY0 501 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 SPG21Q9NZD8 308 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 GABBR1Q9UBS5 961 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 TCEAL9Q9UHQ7 104 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 KMT2EQ8IZD2 1858 aa14.73□□□□□ -0.05
HDAC6-227ENST00000485102 ZNF862O60290 1169 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 DARSP14868 501 aaKnown RBP14.72□□□□□ -0.05
HDAC6-227ENST00000485102 AVPR2P30518 371 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 GPC3P51654 580 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 CLCN3P51790 818 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 ITIH3Q06033 890 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 APOBRQ0VD83 1088 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 PLPP4Q5VZY2 271 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 ABI1Q8IZP0 508 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 SLC39A11Q8N1S5 342 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 BICD2Q8TD16 824 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 NECTIN4Q96NY8 510 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 PHOX2BQ99453 314 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 RIT2Q99578 217 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 ENTPD7Q9NQZ7 604 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 CHST12Q9NRB3 414 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 DACT1Q9NYF0 836 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 NR2E1Q9Y466 385 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 IRAK3Q9Y616 596 aa14.72□□□□□ -0.05
HDAC6-227ENST00000485102 ZFHX2Q9C0A1 2572 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-227ENST00000485102 C2orf71A6NGG8 1288 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 ADAMTS3O15072 1205 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 EDIL3O43854 480 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 ST18O60284 1047 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 OATP04181 439 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 IBSPP21815 317 aaPredicted RBP14.71□□□□□ -0.05
HDAC6-227ENST00000485102 METAP2P50579 478 aaKnown RBP eCLIP14.71□□□□□ -0.05
HDAC6-227ENST00000485102 USP11P51784 963 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 TARBP2Q15633 366 aaKnown RBP14.71□□□□□ -0.05
HDAC6-227ENST00000485102 PRR16Q569H4 304 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 CLLU1OSQ5K130 101 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 TMC7Q7Z402 723 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 UBALD2Q8IYN6 164 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 RDM1Q8NG50 284 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 RIPOR3Q96MK2 946 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 PPP1R16BQ96T49 567 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 ADAM7Q9H2U9 754 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 DISC1Q9NRI5 854 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 AKT3Q9Y243 479 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 HCFC2Q9Y5Z7 792 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 FAM186AA6NE01 2351 aa14.71□□□□□ -0.05
HDAC6-227ENST00000485102 SFNP31947 248 aa14.7□□□□□ -0.06
HDAC6-227ENST00000485102 SMC1AQ14683 1233 aaKnown RBP14.7□□□□□ -0.06
HDAC6-227ENST00000485102 BMS1Q14692 1282 aaKnown RBP14.7□□□□□ -0.06
HDAC6-227ENST00000485102 NTRK3Q16288 839 aa14.7□□□□□ -0.06
HDAC6-227ENST00000485102 MRPL9Q9BYD2 267 aaKnown RBP14.7□□□□□ -0.06
HDAC6-227ENST00000485102 NIFKQ9BYG3 293 aaKnown RBP14.7□□□□□ -0.06
HDAC6-227ENST00000485102 AGXT2Q9BYV1 514 aa14.7□□□□□ -0.06
HDAC6-227ENST00000485102 SAMM50Q9Y512 469 aa14.7□□□□□ -0.06
HDAC6-227ENST00000485102 IGKV6-21A0A0C4DH24 114 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 MSH4O15457 936 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 CLASP2O75122 1294 aaKnown RBP14.69□□□□□ -0.06
HDAC6-227ENST00000485102 ALDH7A1P49419 539 aaKnown RBP14.69□□□□□ -0.06
HDAC6-227ENST00000485102 JAK3P52333 1124 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 VCPP55072 806 aaKnown RBP14.69□□□□□ -0.06
HDAC6-227ENST00000485102 GIT2Q14161 759 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 CES5AQ6NT32 575 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 LRRC71Q8N4P6 559 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 CCDC148Q8NFR7 591 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 SLC5A5Q92911 643 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 CEP89Q96ST8 783 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 RNF26Q9BY78 433 aaPredicted RBP14.69□□□□□ -0.06
HDAC6-227ENST00000485102 SORCS3Q9UPU3 1222 aa14.69□□□□□ -0.06
HDAC6-227ENST00000485102 CFAP54Q96N23 3096 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 PROB1E7EW31 1015 aa14.68□□□□□ -0.06
HDAC6-227ENST00000485102 ZNF623O75123 536 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms