RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SLC39A14Q15043 492 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 FAM173BQ6P4H8 233 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 PRPF31Q8WWY3 499 aaKnown RBP19.8■□□□□ 0.76
SREBF1-213ENST00000485080 CCDC43Q96MW1 224 aaKnown RBP19.8■□□□□ 0.76
SREBF1-213ENST00000485080 USP28Q96RU2 1077 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 MTRQ99707 1265 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 PBX4Q9BYU1 374 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 TSPYL2Q9H2G4 693 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-213ENST00000485080 ATP6V0A4Q9HBG4 840 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 KIAA1024Q9UPX6 916 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 GINS2Q9Y248 185 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 SRPRBQ9Y5M8 271 aaKnown RBP19.8■□□□□ 0.76
SREBF1-213ENST00000485080 COL4A3BPQ9Y5P4 624 aa19.8■□□□□ 0.76
SREBF1-213ENST00000485080 ENPP3O14638 875 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 GJB5O95377 273 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 F13A1P00488 732 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 DNAJB2P25686 324 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 ARL2P36404 184 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 DEFB103AP81534 67 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 POU5F1BQ06416 359 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 ATL3Q6DD88 541 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.79■□□□□ 0.762e-15■■■□□ 16.7
SREBF1-213ENST00000485080 FAM228AQ86W67 206 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 MCPH1Q8NEM0 835 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 TOP1MTQ969P6 601 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 TMEM143Q96AN5 459 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 ZNF396Q96N95 335 aaPredicted RBP19.79■□□□□ 0.76
SREBF1-213ENST00000485080 GCOM2Q9BZD3 368 aaPredicted RBP19.79■□□□□ 0.76
SREBF1-213ENST00000485080 INO80BQ9C086 356 aaPredicted RBP19.79■□□□□ 0.76
SREBF1-213ENST00000485080 NT5C3AQ9H0P0 336 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 TMX1Q9H3N1 280 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 DDX19AQ9NUU7 478 aaKnown RBP19.79■□□□□ 0.76
SREBF1-213ENST00000485080 ST3GAL5Q9UNP4 418 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 DNM3Q9UQ16 869 aa19.79■□□□□ 0.76
SREBF1-213ENST00000485080 MYO9BQ13459 2157 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 PTPRSQ13332 1948 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 EYA4O95677 639 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 CYP11B2P19099 503 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 CDC25AP30304 524 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 LAMTOR4Q0VGL1 99 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 IFNLR1Q8IU57 520 aaPredicted RBP19.78■□□□□ 0.76
SREBF1-213ENST00000485080 RHPN2Q8IUC4 686 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 SPRYD3Q8NCJ5 442 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 NLRP7Q8WX94 980 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 IFT122Q9HBG6 1241 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 MSRAQ9UJ68 235 aa19.78■□□□□ 0.76
SREBF1-213ENST00000485080 FBXO2Q9UK22 296 aaPredicted RBP19.78■□□□□ 0.76
SREBF1-213ENST00000485080 A0A087WWV3 80 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 ARHGEF35A5YM69 484 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 BRD1O95696 1058 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 PKP1Q13835 747 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 PCBP1Q15365 356 aaKnown RBP eCLIP19.77■□□□□ 0.76
SREBF1-213ENST00000485080 TMEM119Q4V9L6 283 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 PADI6Q6TGC4 694 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 RTN4RL1Q86UN2 441 aaPredicted RBP19.77■□□□□ 0.76
SREBF1-213ENST00000485080 CRIPAKQ8N1N5 446 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 LINC01599Q8WXQ3 324 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 TIFAQ96CG3 184 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 PNMA5Q96PV4 448 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 RAD9AQ99638 391 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 NFKBIZQ9BYH8 718 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 CCSER1Q9C0I3 900 aa19.77■□□□□ 0.76
SREBF1-213ENST00000485080 A0A087WZ62 844 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 YEATS4O95619 227 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 PBX2P40425 430 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 UBA7P41226 1012 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 HTRA4P83105 476 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-213ENST00000485080 NFX1Q12986 1120 aaKnown RBP19.76■□□□□ 0.75
SREBF1-213ENST00000485080 DSC3Q14574 896 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 SRGAP1Q7Z6B7 1085 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 CABP7Q86V35 215 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 KSR1Q8IVT5 923 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 LINC00301Q8NCQ3 95 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 PPP1R16BQ96T49 567 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 FDXACB1Q9BRP7 624 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-213ENST00000485080 BHMT2Q9H2M3 363 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 RGS18Q9NS28 235 aa19.76■□□□□ 0.75
SREBF1-213ENST00000485080 YBX2Q9Y2T7 364 aaKnown RBP19.76■□□□□ 0.75
SREBF1-213ENST00000485080 MYH15Q9Y2K3 1946 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 USO1O60763 962 aaKnown RBP19.75■□□□□ 0.75
SREBF1-213ENST00000485080 PPP6R2O75170 966 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 RABGGTBP53611 331 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 PTENP60484 403 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 FAM189BP81408 668 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 GRIN1Q05586 938 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 GRB10Q13322 594 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 MYOCDQ8IZQ8 938 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 SCLT1Q96NL6 688 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 TRAIPQ9BWF2 469 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 CHST12Q9NRB3 414 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 C1orf112Q9NSG2 853 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 RNF216Q9NWF9 866 aaPredicted RBP19.75■□□□□ 0.75
SREBF1-213ENST00000485080 TRANK1O15050 2925 aa19.75■□□□□ 0.75
SREBF1-213ENST00000485080 GBF1Q92538 1859 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 TLL1O43897 1013 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 SFPQP23246 707 aaKnown RBP eCLIP19.74■□□□□ 0.75
SREBF1-213ENST00000485080 GLRA2P23416 452 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 MARCKSP29966 332 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-213ENST00000485080 TFDP1Q14186 410 aa19.74■□□□□ 0.75
SREBF1-213ENST00000485080 ZNF697Q5TEC3 545 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms