RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 SPATA31C1P0DKV0 1188 aa21.34■■□□□ 1.01
SNX17-206ENST00000484886 EIF4BP23588 611 aaKnown RBP21.34■■□□□ 1.01
SNX17-206ENST00000484886 POTEGQ6S5H5 508 aa21.34■■□□□ 1.01
SNX17-206ENST00000484886 FAM228AQ86W67 206 aa21.34■■□□□ 1.01
SNX17-206ENST00000484886 TCP11Q8WWU5 503 aa21.34■■□□□ 1.01
SNX17-206ENST00000484886 PSPC1Q8WXF1 523 aaKnown RBP21.34■■□□□ 1.01
SNX17-206ENST00000484886 TOP1MTQ969P6 601 aa21.34■■□□□ 1.01
SNX17-206ENST00000484886 MTRQ99707 1265 aa21.34■■□□□ 1.01
SNX17-206ENST00000484886 GCOM2Q9BZD3 368 aaPredicted RBP21.34■■□□□ 1.01
SNX17-206ENST00000484886 PRDM12Q9H4Q4 367 aa21.34■■□□□ 1.01
SNX17-206ENST00000484886 DHX33Q9H6R0 707 aaKnown RBP21.34■■□□□ 1.01
SNX17-206ENST00000484886 CERS4Q9HA82 394 aa21.34■■□□□ 1.01
SNX17-206ENST00000484886 GAS2O43903 313 aaKnown RBP21.33■■□□□ 1.01
SNX17-206ENST00000484886 RPA1P27694 616 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 PRPHP41219 470 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 ATP2C1P98194 919 aaPredicted RBP21.33■■□□□ 1.01
SNX17-206ENST00000484886 PDIA5Q14554 519 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 SNX29Q8TEQ0 813 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 LINC01599Q8WXQ3 324 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 NACC1Q96RE7 527 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 TSPYL2Q9H2G4 693 aaPredicted RBP21.33■■□□□ 1.01
SNX17-206ENST00000484886 TMX1Q9H3N1 280 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 ATP6V0A4Q9HBG4 840 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 COL4A3BPQ9Y5P4 624 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 STK24Q9Y6E0 443 aa21.33■■□□□ 1.01
SNX17-206ENST00000484886 A0A087WZ62 844 aa21.32■■□□□ 1
SNX17-206ENST00000484886 USO1O60763 962 aaKnown RBP21.32■■□□□ 1
SNX17-206ENST00000484886 DGAT1O75907 488 aa21.32■■□□□ 1
SNX17-206ENST00000484886 DARSP14868 501 aaKnown RBP21.32■■□□□ 1
SNX17-206ENST00000484886 FOSL2P15408 326 aa21.32■■□□□ 1
SNX17-206ENST00000484886 RARRES1P49788 294 aa21.32■■□□□ 1
SNX17-206ENST00000484886 TAP1Q03518 808 aa21.32■■□□□ 1
SNX17-206ENST00000484886 KRT79Q5XKE5 535 aa21.32■■□□□ 1
SNX17-206ENST00000484886 ZNF410Q86VK4 478 aa21.32■■□□□ 1
SNX17-206ENST00000484886 KSR1Q8IVT5 923 aa21.32■■□□□ 1
SNX17-206ENST00000484886 PRPF31Q8WWY3 499 aaKnown RBP21.32■■□□□ 1
SNX17-206ENST00000484886 GAS2L1Q99501 681 aaPredicted RBP21.32■■□□□ 1
SNX17-206ENST00000484886 ADAM2Q99965 735 aa21.32■■□□□ 1
SNX17-206ENST00000484886 FDXACB1Q9BRP7 624 aaPredicted RBP21.32■■□□□ 1
SNX17-206ENST00000484886 LRFN2Q9ULH4 789 aa21.32■■□□□ 1
SNX17-206ENST00000484886 STXBP5LQ9Y2K9 1186 aa21.32■■□□□ 1
SNX17-206ENST00000484886 VWA3AA6NCI4 1184 aa21.31■■□□□ 1
SNX17-206ENST00000484886 CSDE1O75534 798 aaKnown RBP21.31■■□□□ 1
SNX17-206ENST00000484886 ARHGEF15O94989 841 aa21.31■■□□□ 1
SNX17-206ENST00000484886 SRGAP2CP0DJJ0 459 aa21.31■■□□□ 1
SNX17-206ENST00000484886 XRCC6P12956 609 aaKnown RBP eCLIP21.31■■□□□ 1
SNX17-206ENST00000484886 FGFR4P22455 802 aa21.31■■□□□ 1
SNX17-206ENST00000484886 ZRSR1Q15695 479 aaKnown RBP21.31■■□□□ 1
SNX17-206ENST00000484886 RTN4RL1Q86UN2 441 aaPredicted RBP21.31■■□□□ 1
SNX17-206ENST00000484886 IGSF22Q8N9C0 903 aa21.31■■□□□ 1
SNX17-206ENST00000484886 SPRYD3Q8NCJ5 442 aa21.31■■□□□ 1
SNX17-206ENST00000484886 ARNTL2Q8WYA1 636 aa21.31■■□□□ 1
SNX17-206ENST00000484886 MTUS1Q9ULD2 1270 aa21.31■■□□□ 1
SNX17-206ENST00000484886 ARHGEF35A5YM69 484 aa21.3■■□□□ 1
SNX17-206ENST00000484886 PP2D1A8MPX8 630 aa21.3■■□□□ 1
SNX17-206ENST00000484886 STX6O43752 255 aa21.3■■□□□ 1
SNX17-206ENST00000484886 MGEA5O60502 916 aa21.3■■□□□ 1
SNX17-206ENST00000484886 BMP15O95972 392 aa21.3■■□□□ 1
SNX17-206ENST00000484886 STAG3L1P0CL83 205 aa21.3■■□□□ 1
SNX17-206ENST00000484886 ZSCAN20P17040 1043 aaPredicted RBP21.3■■□□□ 1
SNX17-206ENST00000484886 SFPQP23246 707 aaKnown RBP eCLIP21.3■■□□□ 1
SNX17-206ENST00000484886 HTRA4P83105 476 aaPredicted RBP21.3■■□□□ 1
SNX17-206ENST00000484886 LAMTOR4Q0VGL1 99 aa21.3■■□□□ 1
SNX17-206ENST00000484886 IL17AQ16552 155 aa21.3■■□□□ 1
SNX17-206ENST00000484886 INO80BQ9C086 356 aaPredicted RBP21.3■■□□□ 1
SNX17-206ENST00000484886 C1orf112Q9NSG2 853 aa21.3■■□□□ 1
SNX17-206ENST00000484886 DBR1Q9UK59 544 aaKnown RBP21.3■■□□□ 1
SNX17-206ENST00000484886 KIAA1024Q9UPX6 916 aa21.3■■□□□ 1
SNX17-206ENST00000484886 LINC01553A4QN01 128 aa21.29■■□□□ 1
SNX17-206ENST00000484886 MUTP22033 750 aa21.29■■□□□ 1
SNX17-206ENST00000484886 FAM43BQ6ZT52 329 aaPredicted RBP21.29■■□□□ 1
SNX17-206ENST00000484886 MAEAQ7L5Y9 396 aa21.29■■□□□ 1
SNX17-206ENST00000484886 NPAS4Q8IUM7 802 aa21.29■■□□□ 1
SNX17-206ENST00000484886 XPNPEP1Q9NQW7 623 aa21.29■■□□□ 1
SNX17-206ENST00000484886 DDX19AQ9NUU7 478 aaKnown RBP21.29■■□□□ 1
SNX17-206ENST00000484886 MTMR6Q9Y217 621 aa21.29■■□□□ 1
SNX17-206ENST00000484886 PCDHB7Q9Y5E2 793 aa21.29■■□□□ 1
SNX17-206ENST00000484886 MYO9BQ13459 2157 aa21.29■■□□□ 1
SNX17-206ENST00000484886 TTC3P53804 2025 aa21.28■■□□□ 1
SNX17-206ENST00000484886 ASAP2O43150 1006 aa21.28■■□□□ 1
SNX17-206ENST00000484886 IGFBP4P22692 258 aa21.28■■□□□ 1
SNX17-206ENST00000484886 CDC25AP30304 524 aa21.28■■□□□ 1
SNX17-206ENST00000484886 SARSP49591 514 aaKnown RBP21.28■■□□□ 1
SNX17-206ENST00000484886 RESTQ13127 1097 aa21.28■■□□□ 1
SNX17-206ENST00000484886 TFDP1Q14186 410 aa21.28■■□□□ 1
SNX17-206ENST00000484886 MXD4Q14582 209 aaPredicted RBP21.28■■□□□ 1
SNX17-206ENST00000484886 SF3A1Q15459 793 aaKnown RBP21.28■■□□□ 1
SNX17-206ENST00000484886 ARL6IP4Q66PJ3 421 aaKnown RBP21.28■■□□□ 1
SNX17-206ENST00000484886 SLC24A5Q71RS6 500 aa21.28■■□□□ 1
SNX17-206ENST00000484886 CATSPER4Q7RTX7 472 aa21.28■■□□□ 1
SNX17-206ENST00000484886 SPRED2Q7Z698 418 aa21.28■■□□□ 1
SNX17-206ENST00000484886 RNF149Q8NC42 400 aa21.28■■□□□ 1
SNX17-206ENST00000484886 TGS1Q96RS0 853 aaKnown RBP21.28■■□□□ 1
SNX17-206ENST00000484886 POLR3FQ9H1D9 316 aaPredicted RBP21.28■■□□□ 1
SNX17-206ENST00000484886 RGS18Q9NS28 235 aa21.28■■□□□ 1
SNX17-206ENST00000484886 RNF216Q9NWF9 866 aaPredicted RBP21.28■■□□□ 1
SNX17-206ENST00000484886 PHKA2P46019 1235 aa21.27■■□□□ 1
SNX17-206ENST00000484886 ECM1Q16610 540 aa21.27■■□□□ 1
SNX17-206ENST00000484886 FAM102BQ5T8I3 360 aa21.27■■□□□ 1
SNX17-206ENST00000484886 PADI6Q6TGC4 694 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms