RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 CSDE1O75534 798 aaKnown RBP14.44□□□□□ -0.1
HDAC1-209ENST00000484305 LINC00271P0C7V0 271 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
HDAC1-209ENST00000484305 YWHABP31946 246 aaKnown RBP14.44□□□□□ -0.1
HDAC1-209ENST00000484305 SARSP49591 514 aaKnown RBP14.44□□□□□ -0.1
HDAC1-209ENST00000484305 GATMP50440 423 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 GNL2Q13823 731 aaKnown RBP14.44□□□□□ -0.1
HDAC1-209ENST00000484305 DSC3Q14574 896 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 ZNF174Q15697 407 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 ZNF710Q8N1W2 664 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 IL27Q8NEV9 243 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 NLRP7Q8WX94 980 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 CEP170P1Q96L14 293 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 SCLT1Q96NL6 688 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 SAMD11Q96NU1 681 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 HSD17B14Q9BPX1 270 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 ZSWIM4Q9H7M6 989 aa14.44□□□□□ -0.1
HDAC1-209ENST00000484305 SUCLA2Q9P2R7 463 aaPredicted RBP14.44□□□□□ -0.1
HDAC1-209ENST00000484305 POTEMA6NI47 508 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 C9IYK1 514 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 STAG3L1P0CL83 205 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 FGFR4P22455 802 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC1-209ENST00000484305 BTG3Q14201 252 aaPredicted RBP14.43□□□□□ -0.1
HDAC1-209ENST00000484305 XKR9Q5GH70 373 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 TTC38Q5R3I4 469 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 FAM43BQ6ZT52 329 aaPredicted RBP14.43□□□□□ -0.1
HDAC1-209ENST00000484305 SLC24A5Q71RS6 500 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 OTUD6AQ7L8S5 288 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 RHPN2Q8IUC4 686 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 KSR1Q8IVT5 923 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 DHX33Q9H6R0 707 aaKnown RBP14.43□□□□□ -0.1
HDAC1-209ENST00000484305 C1orf112Q9NSG2 853 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 LMCD1Q9NZU5 365 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 LRFN2Q9ULH4 789 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 PCDHB7Q9Y5E2 793 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 ATG2AQ2TAZ0 1938 aa14.43□□□□□ -0.1
HDAC1-209ENST00000484305 A0A087WZ62 844 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 H3BNC9 293 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 BMPR1AP36894 532 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 POLGP54098 1239 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-209ENST00000484305 CDC42EP1Q00587 391 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 GPM6BQ13491 265 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 NBR1Q14596 966 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 PAN2Q504Q3 1202 aaKnown RBP14.42□□□□□ -0.1
HDAC1-209ENST00000484305 SLC7A3Q8WY07 619 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 CLP1Q92989 425 aaKnown RBP14.42□□□□□ -0.1
HDAC1-209ENST00000484305 TMEM143Q96AN5 459 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 JPH2Q9BR39 696 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-209ENST00000484305 FDXACB1Q9BRP7 624 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-209ENST00000484305 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
HDAC1-209ENST00000484305 PPME1Q9Y570 386 aa14.42□□□□□ -0.1
HDAC1-209ENST00000484305 MRPL42Q9Y6G3 142 aaKnown RBP14.42□□□□□ -0.1
HDAC1-209ENST00000484305 MYO7AQ13402 2215 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 A0A087WWV3 80 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 C5orf67F2Z3F1 127 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 DLL1O00548 723 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 LYPLA2O95372 231 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 OR52Z1P0C646 297 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 SPATA31C1P0DKV0 1188 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 GJB2P29033 226 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 CTNNB1P35222 781 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 RFC5P40937 340 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 TECP42680 631 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 MCM2P49736 904 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 TOB1P50616 345 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-209ENST00000484305 FAM189BP81408 668 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 ORC2Q13416 577 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-209ENST00000484305 EMC2Q15006 297 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 SKIV2LQ15477 1246 aaKnown RBP14.41□□□□□ -0.1
HDAC1-209ENST00000484305 FAM102BQ5T8I3 360 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 ZNF410Q86VK4 478 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 EXOC8Q8IYI6 725 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 CMTR2Q8IYT2 770 aaKnown RBP14.41□□□□□ -0.1
HDAC1-209ENST00000484305 C4orf32Q8N8J7 132 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 NEK9Q8TD19 979 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 PRPF31Q8WWY3 499 aaKnown RBP14.41□□□□□ -0.1
HDAC1-209ENST00000484305 NLRP4Q96MN2 994 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 BACH2Q9BYV9 841 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 GCOM2Q9BZD3 368 aaPredicted RBP14.41□□□□□ -0.1
HDAC1-209ENST00000484305 IFT122Q9HBG6 1241 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 THEGQ9P2T0 379 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 KIF3AQ9Y496 699 aa14.41□□□□□ -0.1
HDAC1-209ENST00000484305 ZSCAN20P17040 1043 aaPredicted RBP14.4□□□□□ -0.1
HDAC1-209ENST00000484305 TRAPPC10P48553 1259 aa14.4□□□□□ -0.1
HDAC1-209ENST00000484305 CATSPER3Q86XQ3 398 aa14.4□□□□□ -0.1
HDAC1-209ENST00000484305 PIGOQ8TEQ8 1089 aa14.4□□□□□ -0.1
HDAC1-209ENST00000484305 COL25A1Q9BXS0 654 aaPredicted RBP14.4□□□□□ -0.1
HDAC1-209ENST00000484305 XPNPEP1Q9NQW7 623 aa14.4□□□□□ -0.1
HDAC1-209ENST00000484305 TMEM161AQ9NX61 479 aa14.4□□□□□ -0.1
HDAC1-209ENST00000484305 NOL7Q9UMY1 257 aaKnown RBP14.4□□□□□ -0.1
HDAC1-209ENST00000484305 RWDD3Q9Y3V2 267 aa14.4□□□□□ -0.1
HDAC1-209ENST00000484305 PCDHB6Q9Y5E3 794 aa14.4□□□□□ -0.1
HDAC1-209ENST00000484305 COL4A3BPQ9Y5P4 624 aa14.4□□□□□ -0.1
HDAC1-209ENST00000484305 BRWD1Q9NSI6 2320 aa14.4□□□□□ -0.11
HDAC1-209ENST00000484305 SPTBN5Q9NRC6 3674 aaKnown RBP14.39□□□□□ -0.11
HDAC1-209ENST00000484305 TBKBP1A7MCY6 615 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 GRM6O15303 877 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 MED24O75448 989 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 RB1P06400 928 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms