RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 KLRF2D3W0D1 207 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 CES2O00748 559 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 MYBP10242 640 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 ZNF131P52739 623 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 INHBCP55103 352 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 SIK1P57059 783 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 KCNMA1Q12791 1236 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 ITPK1Q13572 414 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 PLS1Q14651 629 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 MKNK2Q9HBH9 465 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 ATXN10Q9UBB4 475 aa12.52□□□□□ -0.41
SEC61A1-205ENST00000483956 ZCWPW2Q504Y3 356 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 MEI1Q5TIA1 1274 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 ARMCX6Q7L4S7 300 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 TBCKQ8TEA7 893 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 DYNLL2Q96FJ2 89 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 HGSO14964 777 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 TLR2O60603 784 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 PALMO75781 387 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 PEX5P50542 639 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 SFSWAPQ12872 951 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 BNIP1Q12981 228 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 TDRD12Q587J7 1177 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 SLC10A5Q5PT55 438 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 SFMBT2Q5VUG0 894 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 MIPOL1Q8TD10 442 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 RAD54LQ92698 747 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 PBKQ96KB5 322 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 PRMT1Q99873 361 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 ATP6V0A2Q9Y487 856 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 NOL4O94818 638 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 PSMC4P43686 418 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 IFNAR2P48551 515 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 DZIP1Q86YF9 867 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 REXO1Q8N1G1 1221 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 DYDC1Q8WWB3 177 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 TLCD1Q96CP7 247 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 TRAPPC9Q96Q05 1148 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 VCXQ9H320 206 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 TMEM59LQ9UK28 342 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 COL4A3BPQ9Y5P4 624 aa12.51□□□□□ -0.41
SEC61A1-205ENST00000483956 BTNL10A8MVZ5 291 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 FLOT1O75955 427 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 GBP1P32455 592 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 SLC18A3Q16572 532 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 TMEM266Q2M3C6 531 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 TMEM119Q4V9L6 283 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 FAM83BQ5T0W9 1011 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 ASRGL1Q7L266 308 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 ZNF444Q8N0Y2 327 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 IFT74Q96LB3 600 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 PPP1R12CQ9BZL4 782 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 RNPEPL1Q9HAU8 725 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 DMAP1Q9NPF5 467 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 RHBDL2Q9NX52 303 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 PACSIN2Q9UNF0 486 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 MYH7BA7E2Y1 1941 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 A0A0G2JS52 829 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 RGL2O15211 777 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 FTCDO95954 541 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 RASA1P20936 1047 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 CALB2P22676 271 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 GSTT1P30711 240 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 TNNC1P63316 161 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 FKBP3Q00688 224 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 MPP3Q13368 585 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 CALCRLQ16602 461 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 SOGA3Q5TF21 947 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 TMC4Q7Z404 712 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 CDK5RAP3Q96JB5 506 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 CEP63Q96MT8 703 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 STX8Q9UNK0 236 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 IRS2Q9Y4H2 1338 aa12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 DDX60LQ5H9U9 1706 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-205ENST00000483956 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 SNED1Q8TER0 1413 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 SNX3O60493 162 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 TXKP42681 527 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 LCA5Q86VQ0 697 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 MYOCDQ8IZQ8 938 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 USP38Q8NB14 1042 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 UTP4Q969X6 686 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 ADAM7Q9H2U9 754 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 SEC63Q9UGP8 760 aaKnown RBP12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 ZNF831Q5JPB2 1677 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 PEX11AO75192 247 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 WFS1O76024 890 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 GNA14O95837 355 aa12.49□□□□□ -0.41
SEC61A1-205ENST00000483956 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms